| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0312 |
|---|
| Symbol | |
|---|
| ID | 3997467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 285696 |
|---|
| End bp | 287366 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637958142 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_565064 |
|---|
| Protein GI | 91772372 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATG AACATAAAAT GCTTAAGGGT ATAAGTAGTG ATCTTGAATC TGCGCTTCGT
CAATCCCTTG AAGAAATAAA ATTGTCAGCC GAAACAAAAA TTCGGTTAGA ATCTGTTATT
AGCAAGAGTC CTGCTGTTGT ATTTTTCTGG TGTGCAAAAG ATGACCGTCC GGTCGAGTTC
GTGACCGATA ACATTGAAAG GTTCGGTTAC TCAAAAGAAG ATTTTGTTAC TGGCACATTA
CTTTATGACA GCATCATACA TCCGGATGAT CGTGATGGTG TCAAGGACAT AATTTCGGAG
TCTGTCAATG CCGGGATAGA TGAGTTCAAT TGTGAGTACA GGATCGTAAC AGAATCCAAT
GATATAAAAT GGGTCTATGA AACGACAGTG ATACATCGAA CAACTGATTC AACTGTCGAT
CACTTCTATG GTATCCTTTT TGACATAACT GGCCGAAAGC GTGCTGAACA ATCGATTGCA
GATCATGAAC GTGATATTTC TGTACTTTAT TCTGCTGTGA CACTTGCATC AGAATCCCTT
GATATTGATG ATCTGCTTGC TGAAATTCTA ATGGAACTTG GGGACCTTTT CAAGATCGAT
GCTGGCGGTG TCTACATAAT CGATCATGAT CAATATAAAG CAAACCTCAG GGCGAACATT
GGTACGGATG ATGTGCTTGC GTCTACTATC CACTATTCTC AGAATGAGGA TATGTTCAAG
AACGTGACTA ACCTGCCTAA AAATACTATT GTTTCGGATG AGCTCATACG TCAAGGTTCT
CGTTTTGTAA CAAAAACAAA TCTAACTTTT TATCTTCATT CGAGGGACAA GGTCGTAGGC
TTTGTCCTGC TTGTACTTCC TCCCGGATAT CCTCTATCTG AGAAGAACTT GCAGGTCCTT
GAACATGTTG GAAAGCATAT TGGTATCGCT ATTGAGAATG CACAATTGTT CGAAAAGACT
CAAAAAGCCT ATGATGAACT AAGGTCGCTT GACAACCTTA AAAATGAATT CTTTGCAAAC
CTGAGCCATG AGCTAAAAAC GCCCATGATC TCTATCAAAG GCTTCAGTGA GCTTCTGGGT
GATGGTAAAT TTGGTCCGCT TAATGTTGAA CAGAAAAAAG CTAATGATGC AGTTGTGCGT
AATGCGGAGC GATTGAAAGA CCTTATCGAT TCACTGCTTT ATATGTGTAT GGAAAAAGAG
GGTAAGTATA AGTATGATTT TGTCCCCCTC CCCATCAAGA GATTAATTCT TAATTCCCTT
GAAAAGGCCC GTGTTCAAGC TGGCAGCAAC AACATTGTCT TCAGGGATGA AATTCCTGAA
AATATTCCGG TCATCTATGG GGATGAAGAA AGGCTGACAA CCGCATTGAA CAATATTTTG
GACAATGCTG TGAAATTTAT GTTGGAAGGG GAAGTTATCG TCTCGGTACA AGATGAAGCT
GATCATATCC ATCTTCGGAT CAAGGACAAT GGCATCGGAA TTCCAAAAAA CAAAGTGGAT
AAGGTATTTG ACAGCTTCTA CCAGGTCGAT GGTTCACTTA CTCGGATGTA TGGTGGGACT
GGTATAGGTT TGCATGTATC AAAAAGGATC ATTGATGTGC ATAATGGAAA GATCTGGTTG
AAGAGTCTGG AAGGGTTTGG TACGACAGTC CATATACTGT TACCAAAATG A
|
|---|
| Protein sequence | MNDEHKMLKG ISSDLESALR QSLEEIKLSA ETKIRLESVI SKSPAVVFFW CAKDDRPVEF
VTDNIERFGY SKEDFVTGTL LYDSIIHPDD RDGVKDIISE SVNAGIDEFN CEYRIVTESN
DIKWVYETTV IHRTTDSTVD HFYGILFDIT GRKRAEQSIA DHERDISVLY SAVTLASESL
DIDDLLAEIL MELGDLFKID AGGVYIIDHD QYKANLRANI GTDDVLASTI HYSQNEDMFK
NVTNLPKNTI VSDELIRQGS RFVTKTNLTF YLHSRDKVVG FVLLVLPPGY PLSEKNLQVL
EHVGKHIGIA IENAQLFEKT QKAYDELRSL DNLKNEFFAN LSHELKTPMI SIKGFSELLG
DGKFGPLNVE QKKANDAVVR NAERLKDLID SLLYMCMEKE GKYKYDFVPL PIKRLILNSL
EKARVQAGSN NIVFRDEIPE NIPVIYGDEE RLTTALNNIL DNAVKFMLEG EVIVSVQDEA
DHIHLRIKDN GIGIPKNKVD KVFDSFYQVD GSLTRMYGGT GIGLHVSKRI IDVHNGKIWL
KSLEGFGTTV HILLPK
|
|---|
| |