| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0200 |
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| Symbol | |
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| ID | 3997167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 182223 |
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| End bp | 183002 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637958037 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_564960 |
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| Protein GI | 91772268 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.411269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG CTATATCAAG ACTTAAAAAA GATTATTTGT TTAATCTGGC TCTCAAGGGT
CAGCGTGAGG ATGGCCGTGG GTTCGATGAA ACACGTGATC TGATAATTGA GACCAATGTT
ATCGATAAAG CAGAAGGGTC TGCAAAGGTC TTGCTGGGTG ATACTCAGGT ATTGGTTGGT
GTTAAACTTC AGGTGGGTTC TCCTTTCGCG GATTCCGCTG ACAAGGGCGT CATTATCACG
AGTATGGAGC TTAATCCTAT CGCCTCACCA AACTTCGAAG CTGGTCCACC TCGAGAGAAA
GCTATTGAAA TGGCACGTGT GGTAGACCGT GGTATCCGTG AATCAGGCGC AATTGATTTA
AACAAGCTGT GTATTACGGA AGGAGAAGAG GTCTGGATAG TCTTCATAGA TGTTCATGTG
CTTAACGACA GTGGTAATTT ACTGGATGCT GCTTCACTCG GTGCTATTGC AGCACTTATG
ACAGCAACTA TTCCGGGAGA ACGCGAAGGT CGCGGAGAGG ATGTAAAACT GCCTATCCGA
GAAATGCCCG TCTCTCTCTC CTTTATTGAT ATTGGAGGGG AACTTGTCAT TGATGCAACC
AATAATGAGG AATCAGTTAG TGATCTGAGA CTCACTATAG TGACCAATCA GGATGGTTCG
ATCTGTGCTA TGCAGAAAAG TGGTCCAGGT ACGCTCTCAG AAGAAAACTT CCTGAGATCC
GTTGAAAAAT CACGTGAGGT CGGAGCGAAA ATCAGAGAGG AATACCTCCT CAACATCTGA
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| Protein sequence | MSEAISRLKK DYLFNLALKG QREDGRGFDE TRDLIIETNV IDKAEGSAKV LLGDTQVLVG
VKLQVGSPFA DSADKGVIIT SMELNPIASP NFEAGPPREK AIEMARVVDR GIRESGAIDL
NKLCITEGEE VWIVFIDVHV LNDSGNLLDA ASLGAIAALM TATIPGEREG RGEDVKLPIR
EMPVSLSFID IGGELVIDAT NNEESVSDLR LTIVTNQDGS ICAMQKSGPG TLSEENFLRS
VEKSREVGAK IREEYLLNI
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