Gene Mbur_0020 details

Gene Information

• Locus tag: Mbur_0020
• Symbol: rpl18p
• ID: 3996920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 9850
• End bp: 10371
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637957862
• Product: 50S ribosomal protein L18P
• Protein accession: YP_564794
• Protein GI: 91772102
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0256] Ribosomal protein L18

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00000000151629
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACAG GACCCCGTTA TAAAGTTGCA TTCAGGCGAC GAAGGGAAGG GCGTACAGAT 
TATCACCAGA GACTCAGGTT GCTTTTGTCA AGAGAGGACC GTGTTGTTGT GCGTAAGAGC 
GCAAGGCACA TGCAGATACA GCTTGTTGCA CCCGATGCAA ATGGGGATGT AACACTGTCA 
TCCGCGATCT CAAAAGAGCT TGCAAAATAC GGCTATGAAG GATCGACAGG TAACACTACC 
GCAGCATACC TCACAGGGCT CTTGTTTGGT TACAAGACAC TTGCTGAAGG CTATGAGAGC 
GGTGTGTTGG ATATCGGTAT TCAGGCATCA TCCGCAGGTT CCCGTGTCTA CGCAGCACTT 
AAAGGTGTTG TTGATTCAGG ACTGGATGTT CCTCACAACT CCTCAGTGTT CCCATCCGAT 
GAGCGCATAA GGGGAGAACA TGTTGCAGAA TACATGGAAG GATCAAATCT GCCTGAAGTG 
TTCGATGCAG TAAAGGAAAA GATCCTTGCC GAGTTCAGTT AA 

 

Protein sequence

MATGPRYKVA FRRRREGRTD YHQRLRLLLS REDRVVVRKS ARHMQIQLVA PDANGDVTLS 
SAISKELAKY GYEGSTGNTT AAYLTGLLFG YKTLAEGYES GVLDIGIQAS SAGSRVYAAL 
KGVVDSGLDV PHNSSVFPSD ERIRGEHVAE YMEGSNLPEV FDAVKEKILA EFS