| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3710 |
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| Symbol | |
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| ID | 4020272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4450881 |
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| End bp | 4452524 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637957774 |
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| Product | hypothetical protein |
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| Protein accession | YP_564706 |
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| Protein GI | 91795055 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
[COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACTA GAATTCACAT CAAATATTAT TATAGTTTTG CTGCATTATT AGCCGTTCTT
CTCCTGTTCA CTTTTAACCA GCCTTTATTA AAAATTCTTT TTGCATGGCT GGGGCTGTCG
TTATTCTTGG TGAGCTCGGC TTATTGGCTG AATAGTGCGA GCATCTTTAG AAAGTCCATT
AACGGCACTA TACCTTGGTA TGTACGTTGG GGATTTATTC CATTTCTGTT TGCAAGCCAA
GTCTATAACG CTTGGGCTAG AGCACGGGAT ACTGTGCCAG CTATCCAACA AATAGACAGT
CAATTGTACC TAGCTTCACG CTTATTCCCA GCAGATGTTC AAACCCTTAA AGATAAAAAA
ATATCGGCCA TTTTGGATGT GACTGCCGAA TTCGATGCCC TAGATTGGTC CTTAATTGGC
AAGGATGTAG ATTACTTAAA TGTGCCAGTA TTAGATCATA GCGTGCCAAC GGCAGAGCAG
CTTAATCAAG CTATCAATTG GTTACATAGG CAGATAAAAG CGGGCAAGAC GGTTGTTATT
CATTGCGCTT TAGGTCGCGG ACGTTCTGTA CTTGTGCTCG CAGCCTACCT AGTGTGTCGC
CAGAAAGAGA CCACTTTTTT AGAAGTATTA CGTAAGATTA GCAAGATACG TAAAACCGCG
GGGTTAAATC CTTGGCAATT AGCGGCGGTT GAGCAAATTT ATGCAGAAGG CAAAATTAGA
ATCAATAAGC GCGCTTGTAT TATCGCGAAT CCGGTTTCCG GTGGCGGGAA ATGGCAAGAT
TATGCCGAGC AGATAGAGCA AGAGTTATCA GGGTATTTTT CTCTTGAAAT AGTACAAACC
TCTGAAACGA TAACGGCGAC GCTATTAGCG CAAAAGGCTC GGGATTCAGG AGTTGATATT
TTAATCGCTT GTGGTGGAGA CGGCACAGTC AATCAGGTGG CGAGTGTGGC GGTGAGAACA
GATCTTTTGT TAGGTATTAT TCCACTTGGA ACCACGAATG CGTTAAGTCA TGCCTTATTT
GGGGCTAGTA GCAAGTTATT TCCAGTAAGA AAGGCCTTGG ACATTATTAT TCAGGGGAAC
TTAGCATCCA TAGACACGGC AAAGTGTAAT GATGATTTAA TGTTGTTATT GGTGGGTTTA
GGATTTGAAC AGCAAATGAT AGAAAATGCC GATCGAGAGC GTAAAAATGA ATTAGGTCAA
TTGGCCTATA TTGGCGGCTT GCATCGTGCT ATCGATATGA ATCAGATTCA GACTATCACC
ATGGCACTCG ATGATAAAGA AGCCATAACG CTCAACACTC ACAGTTTAGT GATAGCAAAT
GCCTCTCCCA TTACCAGTAT GTTGGCCCAA GGTAATGGCG AACCAGATAT CACAGATGGT
CAGTTGGATA TTACTTGGCT TGATGAAAGC GCTCAGCCGC AAGAGCATAT ACTCAGTTTT
GCTGAGCTTG CCATGGCAGG CATAGGTAAT GTAAAAATGG ATAATAAAGT TCATCATCTT
CATGCAAAGA CAATCAAGTT AAAGGCTAAC ACTCAAATCA AGTATGTCAT CGATGGTGAA
TTGTTTACTG CCGATAGTCT GACGATTCAG ATCCAGCCAA AATCATTAAC CATTTTTGTG
CCCTCAAGCT CAGTTGAGTC ATGA
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| Protein sequence | MLTRIHIKYY YSFAALLAVL LLFTFNQPLL KILFAWLGLS LFLVSSAYWL NSASIFRKSI
NGTIPWYVRW GFIPFLFASQ VYNAWARARD TVPAIQQIDS QLYLASRLFP ADVQTLKDKK
ISAILDVTAE FDALDWSLIG KDVDYLNVPV LDHSVPTAEQ LNQAINWLHR QIKAGKTVVI
HCALGRGRSV LVLAAYLVCR QKETTFLEVL RKISKIRKTA GLNPWQLAAV EQIYAEGKIR
INKRACIIAN PVSGGGKWQD YAEQIEQELS GYFSLEIVQT SETITATLLA QKARDSGVDI
LIACGGDGTV NQVASVAVRT DLLLGIIPLG TTNALSHALF GASSKLFPVR KALDIIIQGN
LASIDTAKCN DDLMLLLVGL GFEQQMIENA DRERKNELGQ LAYIGGLHRA IDMNQIQTIT
MALDDKEAIT LNTHSLVIAN ASPITSMLAQ GNGEPDITDG QLDITWLDES AQPQEHILSF
AELAMAGIGN VKMDNKVHHL HAKTIKLKAN TQIKYVIDGE LFTADSLTIQ IQPKSLTIFV
PSSSVES
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