| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3684 |
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| Symbol | |
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| ID | 4020241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4416453 |
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| End bp | 4417859 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637957743 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_564680 |
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| Protein GI | 91795029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA AATCACGAAT CTTAGCCTCA GTATTGTGCA TGATGGCTGC AAGCGTTACC
GCCAGTGAAT TTGGCGCCTA TTACTCCTTC GAAGGCCAAG GCAATGGCTT TAAAGATACT
TCAAGTAATG ATAATAATGG CTACTTTCTA AACTCAGCCG AAGGCACTTA TACCATGAGT
GGCCGTAATG GCCTGGCATT AGAGAAGGAT GTCTTGGTAG TGGGCACCAT GCCATCCCAT
AAGAAAGACA TGCCGATTAC CGTGTCCGCC TGGGTTCGTA CCTCAGAACT TCAAGGGGTA
CACCCGTTAG TGTCCAAGTT AGATGCCATC GGCAACCAGG GCTTTAGCAT CACGGTTTCC
CCCCAAGGAT TAACCTTCAG CTTAATGGAT CAGGCATTGG CGGGGATCAC GGTATCCACC
TCAGGGCTAC CGTCATTAAC AAGCTGGACC CATGTGGCAG TGACCTACAG TGGCAGTGGC
AAGGCCTCTG GCGTCAAAGT CTATGTGAAC GGTTTGGAGC AAACCACAAC CACGCTTACC
GATAATTTAG CCTTGCAAAC CAATACCTTT GCACCACTTT ATATCGGCGG CTCTATCAGA
GAGCCGGCAC CGTTTCCCGG TGCCATCGAT GAAGTGTTAA TTGCCCCTAC GGCTTATTCA
ATTGGTCAAA TTGGCTGTTT GGCCACTTTT GGCAGTGATT GTGCTACGGC CATCGGCCTA
GGCCCTCGTG GTGAGCAAGG GGCACAGGGA CCTAAAGGGC CTGCAGGCAT TATGGGTGAA
GCGGGTCCTC GCGGCTTGCA AGGCGCAACC GGAGATCAAG GCGCCATGGG GCCCACTGGT
GAAGCCGGTC CTCAAGGGCC CCGTGGGGAT ATTGGCCCGA TAGGCAATCA AGGTGTCAAA
GGCGCCAATG GTGCCAATGG CAGCGATGGT GTTAATGGCC TAGCCGGTGC TACTGGGGCG
AAAGGCCCTC AAGGCCGCGT GGGCGCGACT GGCCCACAGG GTGACATAGG CGCAACCGGC
CCAAGTGGTC CTAAAGGGGT GACAGGCCCT AGAGGGGAGC AAGGTGATAC TGGCCCTCGA
GGGGATGCCG GTGCTCAAGG CCCCATAGGT GCACGAGGCA TCACGGGTGC TACTGGTGCG
AGTGGCCGCC GAGGCCCTGA TGGTGCCATA GGCAATCCAG GCGCACCAGG TGATCGAGGC
GCTCAAGGTT CGCCAGGCGC AAACTCAAGC CAAAGAGGTG ATATCGGTGA GGGAGGGCTC
CCAGCCACCG AGTATTATTC TAGTGCTGTC TTGCATTCCT TGCGAGTACA AAGAGCTGGA
GCTAATGGTG CACAAGGGCC TGTTGGCCCA CAAGGTTATC CTGGGCGCTG TATCTGTACT
GGAAATCAGA TTTGTCAGAT TTATTAA
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| Protein sequence | MKFKSRILAS VLCMMAASVT ASEFGAYYSF EGQGNGFKDT SSNDNNGYFL NSAEGTYTMS
GRNGLALEKD VLVVGTMPSH KKDMPITVSA WVRTSELQGV HPLVSKLDAI GNQGFSITVS
PQGLTFSLMD QALAGITVST SGLPSLTSWT HVAVTYSGSG KASGVKVYVN GLEQTTTTLT
DNLALQTNTF APLYIGGSIR EPAPFPGAID EVLIAPTAYS IGQIGCLATF GSDCATAIGL
GPRGEQGAQG PKGPAGIMGE AGPRGLQGAT GDQGAMGPTG EAGPQGPRGD IGPIGNQGVK
GANGANGSDG VNGLAGATGA KGPQGRVGAT GPQGDIGATG PSGPKGVTGP RGEQGDTGPR
GDAGAQGPIG ARGITGATGA SGRRGPDGAI GNPGAPGDRG AQGSPGANSS QRGDIGEGGL
PATEYYSSAV LHSLRVQRAG ANGAQGPVGP QGYPGRCICT GNQICQIY
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