Gene Sden_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3623 
Symbol 
ID4020180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp4344712 
End bp4345383 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content46% 
IMG OID637957684 
Producthypothetical protein 
Protein accessionYP_564621 
Protein GI91794970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0347369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAT GCCCACTGTG TAAGCACGCT GCCACGCTAT TTCTTCAAGA TAAGAAAAGG 
GCTTTCTTCG ACTGCCCACA ATGTGCATTT GTGTTTGTCG ACCCCAGCGA CCACAGAATG 
CCATCCAACT CATCAACGCC AATTCAAAGC TATGGACGCC AACAAAAAGC AGCCCAGCAG 
CGCCAAGCAA CGCAATTTGT GCTGCCTTTG CTATCTCAAC TCAGTGACTT AACCGGCGAT 
AATCTCTTGG GGTTGAACTT CGGCCATAGT TTAGACCAGC ATTGCATAGA CAAAATTCAA 
GCCAGTGGCC ACCAATTGCT GCAGTACGAC CCATTCAAGG CAACCGAACA GGCCGTGCTG 
CAACAGCAAT ATGACTTCGT GTGTAGCTAT AAAGTATTTG AGAGTTTTAA GCGGCCATTA 
AACCAATGGG CCTTATTGTC CAGCCTAGTT AAACCTCAAG GTTGGCTGGC AATCGGCACC 
GCACTGCTGA CGGATAAATC CCATTTTGCT AAATGGCATC ATAAGAATAA TCCGGCCCAT 
GTCAGCTTCT ATCAGCACAA AACCTTCGAA TACCTAGCCA CTCAGGGGCA ATTTAAGCTA 
TTATTTGCCG CGAAAGAATT AGTTTTGATG CAAAAAGCAG CAAACTCTGG TATAAAGCCC 
ATCCTTATTT AG
 
Protein sequence
MTRCPLCKHA ATLFLQDKKR AFFDCPQCAF VFVDPSDHRM PSNSSTPIQS YGRQQKAAQQ 
RQATQFVLPL LSQLSDLTGD NLLGLNFGHS LDQHCIDKIQ ASGHQLLQYD PFKATEQAVL 
QQQYDFVCSY KVFESFKRPL NQWALLSSLV KPQGWLAIGT ALLTDKSHFA KWHHKNNPAH 
VSFYQHKTFE YLATQGQFKL LFAAKELVLM QKAANSGIKP ILI