| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3580 |
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| Symbol | |
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| ID | 4020137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4294280 |
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| End bp | 4295320 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637957641 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_564578 |
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| Protein GI | 91794927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCATA CTAACAATCC AATCATTAAA CACAAAGCAG GTTTACTCAA TTTAGCTGAA
GAGCTAGGTA ATGTATCTCG AGCATGTAAA GTTATGGGGG TCTCTAGAGA CACATTTTAT
CGCTATCAAG AGCTTGTTGA AGATGGTGGT ATTGACGCTT TAATCGAAAG AACACGCAGA
ACACCCAATC TAAAAAACCG AGTTGATGAA GCAACCGAAC AGTCAGTAAT TAAATATGCT
ATCGACTTCC CTGCTCATGG CCAGCATAGA ACCAGTAATG AACTACGCAA GCTTGGTGTT
TTTGTATCGG GCAGTGGTGT TCGCTCTATT TGGCTTCGTC ATAGCCTAGA GAATTTTAAG
AAACGGCTCA AAGCTTTAGA AGATAAGGTC GCTAATGACG GGATTATACT CACTGATGCG
CAAGTTGCAG CTCTTGAAAA GAAAAAGCAT GATGATGAAG CGTGTGGTGA GATAGAAACC
CATCATCCTG GGTATCTTGG TTCTCAAGAC ACCTTCTATG TCGGCAATTT AAAAGGTGTC
GGTAGGATAT ACCAACAAAC CTTTGTTGAT ACTTACAGCA AGGTAGCATT TGCCAAGCTT
TACACGACTA AAACACCAAT CACAGCGGCC GATGTACTTA ACGATAAAGT CCTGCCTTAT
TTCGAGCACC ACGAGCTTCC AATGCTTCGA ATATTAACGG ATAGAGGAAC AGAATACTGT
GGTCGAGTGG AGCATCATGA TTACCAGTTA TATCTGGCAA TTAATGATAT CGATCATACA
AAAACAAAGG CAATGTCACC TCAGACCAAT GGCATTTGTG AGCGATTTCA TAAGACAATT
TTAAATGAGT TTTATCAAGT CACTTTCCGC AAAAAGTTAT ATGACAATTT AGAAGTGCTG
CAAAAAGATC TAGACGAATG GATGAATTAC TACAACAATG ATCGAACTCA TCAAGGGAAA
GTGTGTTGCG GAAGAACTCC GCTTGAAACA TTGCTTGATG GGAAACGAAT TTGGGCTGAG
AAAAATTTAG CTCAAATCTA A
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| Protein sequence | MFHTNNPIIK HKAGLLNLAE ELGNVSRACK VMGVSRDTFY RYQELVEDGG IDALIERTRR
TPNLKNRVDE ATEQSVIKYA IDFPAHGQHR TSNELRKLGV FVSGSGVRSI WLRHSLENFK
KRLKALEDKV ANDGIILTDA QVAALEKKKH DDEACGEIET HHPGYLGSQD TFYVGNLKGV
GRIYQQTFVD TYSKVAFAKL YTTKTPITAA DVLNDKVLPY FEHHELPMLR ILTDRGTEYC
GRVEHHDYQL YLAINDIDHT KTKAMSPQTN GICERFHKTI LNEFYQVTFR KKLYDNLEVL
QKDLDEWMNY YNNDRTHQGK VCCGRTPLET LLDGKRIWAE KNLAQI
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