Gene Sden_3558 details

Gene Information

• Locus tag: Sden_3558
• ID: 4020112
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 4267937
• End bp: 4268548
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637957616
• Product: hypothetical protein
• Protein accession: YP_564556
• Protein GI: 91794905

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACATA CAGTAAGCAG TAAAACATTG ATTAAAGCCT CATTCGCGGC GGTTATCTTA 
GCGGCAATTG CCTTGGTGAG CTTAATTTTA CCCGCAGAAT ACAATATAGA CCCCACAGGA 
GTGGGCAAGG CCTTAGGCCT GACAGCGCTG GCTCAGCCAG ATTCTAGCAC TCAGATGGCT 
CCTGAATTAG CGGCATCTAA GTCTGACACG TCACAGGGGT CAGCCAGTAC GGTACAAAGT 
GATGCCGCCA AGCTTTCCGA GCATAACATA AGCGTGACTG TGCCTGCGGG ACGCGGGGTG 
GAGTATAAGT TTTATATGAC GCAATTTGCC AAGATGGAAT ACCAGTGGAG CACTAACACT 
GAAACCGCCA CTGACACCGT CACTAATAAT AGCAGCCCGA GCCCGCTATA TTTTGACTTA 
CACGGCGAGC CACAGGGCGA CACCACAGGG TATTTTGAGA GCTACGTCAT TGCCACAAGT 
GATGAAATGA AAGGCAGTTT TACCGCCCCC TTTGCAGGCT CCCACGGGTG GTATTGGAAA 
AACACCAGCG CACAAGCCGT TACCGTGCAG CTTAAGGTCA GCGGTGACTT TACTGTGATA 
GGGCTTAAAT AG 

 

Protein sequence

MQHTVSSKTL IKASFAAVIL AAIALVSLIL PAEYNIDPTG VGKALGLTAL AQPDSSTQMA 
PELAASKSDT SQGSASTVQS DAAKLSEHNI SVTVPAGRGV EYKFYMTQFA KMEYQWSTNT 
ETATDTVTNN SSPSPLYFDL HGEPQGDTTG YFESYVIATS DEMKGSFTAP FAGSHGWYWK 
NTSAQAVTVQ LKVSGDFTVI GLK