| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3500 |
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| Symbol | |
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| ID | 4020054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4187520 |
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| End bp | 4188788 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957558 |
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| Product | inner membrane protein YjeH |
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| Protein accession | YP_564498 |
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| Protein GI | 91794847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000277884 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAA TTACCGCAAC AATTGGTCGC TGGCAAGGCG CCGGTTTGAT GGCCACCACT
TTGCTTGGCA CCGGGGTGTT TATACTACCC CAGATGACGA TTGCCGTCGC AGGAGATGGC
GCCTTGATTG CTTGGCTTAT TTTAACCTTA GCCATCATTC CCGTGGCCTT AGTCTTTGGT
TTACTTTCGG GCCGCTTTCC TCATGCTGGC GGCCCGGCTT ACTTTATTGA GCGCGCATTT
GGGCCGACAT TGGGCCGCAC CATGGGGCTT ATTTTCTTAT TAGTTATCCC CATTGGTGCA
CCAGCGGCTA TCTTGATGAC CTTTCAATTT TTCAATGCGT TGCTGCCTAT GTCGGGTTGG
AGTCAAGTGG GCGCCGAGCT TGGCATAGTG GCTTTATTAT TTCTCCTTAA TGTGCGCGGT
ATACAGGTGA GTGCCAAACT GCAATTTGCC TTAACCTTAG CCATAGTGGC TGTGGTGGTG
CTCTTGTTTG GAGCCAGCGG CGCCGATGTG GCTCAATTTG AAGCATTAAC CCTCACCAAT
ATAGAGTTTG ATGGGGTGAT GTTGGCCATG GGAATAGGTT TCTGGAGTTT TCTTGGCATA
GAGGCCATGA CTCATCTTGC CAATGATTTC CGCCGGCCAG ATAAAGACAT GTTGCCCGCT
ATGATGATAG GGACAGTATT GGTGGGGATT ATTTACCTTG CCTGTACCTT GTTGCTGCTG
ATGTTGCCCA CGGGCACGAC AGGGGTGGCC ATGATAACGG CGTTCGATCT TTTACTCGGT
GGCTATGGTG CCCAGGTGAT AGGTATTTTG GGTATAGCCA GTGGCATTGC GACTGTGAAT
GTCTACTGCG CCAGTGGTGC TAGGCTGCTG TGGAGCTTTA GCCGTGACGG CATATTACCT
AAGTATTTTG ATAAGCTTAA TGCGGCTGGC GTGCCATTAA GGGGGTTAGT CTTCTTGTTG
CTGGCCATGG CTGTGGTGAT AGTGTTGAGT TTTGTCACTG GCCAAGAGCT TGAGCATTTA
ATTGCTTGGA GCAACGGTAT TTTTGTGATT ATTTACTTGC TGGCCATGCT TTCGGCGATT
CGGCTATTGA GTAAGCGCTT CTTACCTTTG ATTATTACTG GCTGTTTTTT CTGTATTGGC
CTTGGCTTCG CACTCGGTTC ACACATGTGG TATGCCATTC TCATGGTCGC TTTGATAGCA
CCATTTCTGT GGTGGCAACA CGGGCATTTA AGCCGTAAGC AGCTGACTAA GCTTGAGTCG
CACACTTGA
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| Protein sequence | MNQITATIGR WQGAGLMATT LLGTGVFILP QMTIAVAGDG ALIAWLILTL AIIPVALVFG
LLSGRFPHAG GPAYFIERAF GPTLGRTMGL IFLLVIPIGA PAAILMTFQF FNALLPMSGW
SQVGAELGIV ALLFLLNVRG IQVSAKLQFA LTLAIVAVVV LLFGASGADV AQFEALTLTN
IEFDGVMLAM GIGFWSFLGI EAMTHLANDF RRPDKDMLPA MMIGTVLVGI IYLACTLLLL
MLPTGTTGVA MITAFDLLLG GYGAQVIGIL GIASGIATVN VYCASGARLL WSFSRDGILP
KYFDKLNAAG VPLRGLVFLL LAMAVVIVLS FVTGQELEHL IAWSNGIFVI IYLLAMLSAI
RLLSKRFLPL IITGCFFCIG LGFALGSHMW YAILMVALIA PFLWWQHGHL SRKQLTKLES
HT
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