| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3483 |
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| Symbol | |
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| ID | 4020037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4169389 |
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| End bp | 4170453 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957541 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_564481 |
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| Protein GI | 91794830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA TAATTTTGCA AAATACTCTT TTTAAGCCAT TGGCTAAATG GCGTTATTTA
TCCATTAACA GGCTAGGTTT ATTCACCGCC TTACTTTTAT TATTCTTGCT CAGTGGTTGC
GATAAAGCAC CGCCTAGTCA AACCTCCTTG AGCCAACATA GGTTGGTTGA GGGCCGGCTG
GTGGATGGCG CCCTGTCAAA AGATGGCTTG CTGGCCGTGA CTTTGAGCCT GAACGGTGAT
GTAAATGTGT GGGATCTTGT CTCAAAACAG GCCTTTGTCA CTTGGCGTAA GGCCGATTTT
AATGACGATA TTTATCAGTT AATGCTATCT GGGGATAAGC AATACTTATT GGCTGCGAGT
CAGCGACAGT TGTTTTTACT GGATGTAACC ACAGGTGAAC GATTATTGAA TTGGCAAGCC
GAGGCATTTA ATCCGGATGC CAACATTAGC AGCATTCACC TTAATTACAG TGCTAGCCAA
ATATTGGTGG GCATGAGTGA TGGCTCAATT AACACTGTGG ATAGAAGCAG TAACAGTTTG
TCATTGTTTA AACAGCATTC AGCCGAAGTG AGTGCAGTGG CCTTTCTCTC CTCTTCAGAC
CAAGTGCTAT CCACGGGTCA TGATGGTGAG CTGCTAATAT GGGCCACGGC AACGGGCAAG
GTGCACAGAA GATTTGCATT GCCACATAGG ATCATGAGTC TAGCGATAGA CAGCGCTAAT
CGCCGCCTTT TTGCGGCCGA TGCCTTAGAT AATCATTTCA TCATAGACCC AGAGAGTGCG
TCATTTTCAA GCATGGACGC CCTAGGTGCC AGTGTTAACT TGCAGTATGT AGAGAGATAC
CGTTATTTCC GTCGGGCCCT GTTTGTTAAA CATGGAAACA TGCTGATCAC AGCGACCTCC
AAACAAGACA TGATTGGCTG GGATAGCCAA AGTGGCGCTG AATTAGTCCA TTGGCGTTTG
CAGGCTTATT CTGCAAGCAC AAGTGTTACT GCCATGGCAG TCAATGGCGA GGGGCAACTG
GTGACATTAA GCTCTGATGG CGCAATTGAG CTATGGCCCC TTTAA
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| Protein sequence | MNMIILQNTL FKPLAKWRYL SINRLGLFTA LLLLFLLSGC DKAPPSQTSL SQHRLVEGRL
VDGALSKDGL LAVTLSLNGD VNVWDLVSKQ AFVTWRKADF NDDIYQLMLS GDKQYLLAAS
QRQLFLLDVT TGERLLNWQA EAFNPDANIS SIHLNYSASQ ILVGMSDGSI NTVDRSSNSL
SLFKQHSAEV SAVAFLSSSD QVLSTGHDGE LLIWATATGK VHRRFALPHR IMSLAIDSAN
RRLFAADALD NHFIIDPESA SFSSMDALGA SVNLQYVERY RYFRRALFVK HGNMLITATS
KQDMIGWDSQ SGAELVHWRL QAYSASTSVT AMAVNGEGQL VTLSSDGAIE LWPL
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