| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3480 |
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| Symbol | |
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| ID | 4020034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4166217 |
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| End bp | 4166855 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957538 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_564478 |
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| Protein GI | 91794827 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.92089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA CACTGAAAAA ACTAATGACT ATGTTAGCCG CAGTGCAGCT ATACCTAGTA
TTGGCGCTGT TTGGCAGTAG TGTGGCCTTG GCGCAAATGC CCGTTCTGAA AGGCATAGGT
GGAGAGTTCA GCCTAAAAAG CAGTAAGGGC GGTGAGGTGA GTCTGTCTGA CTTTAAAGAT
AAAGTCGTGC TGATGTTTTT TGGCTACACC AATTGCGCCG ATATTTGCCC CACCACAATG
GCGCATATCA GCCAGATGAT GAACAAATTA ACGCCTGAGC AACGCAGCAG AGTTCAAGTG
CTTTTTGTTA GCATAGACAG CGATTATGAC ACCCCCAAGC ATTTAAATAA GTACTTAGCC
TATTTTGACC CCAGCTTTAT TGGGCTGGTG GATGAACGGG AAAAAATCGA TTATGTGGCG
AAACTGTTTC ACGCCGATTA CATTAAACTC GCCAATGATA AGGTGACGAC TGAGTTCAAG
AAGTTATCGT TAGATGATGA AAAACAAGAA CAAAAAGGGT ACCTCTATTC CCACAGCGCC
AAAATTTTTG TGATGGATAC CCACAGCCGG GTGCGGGGCT TCTTCTATGC GGGTACGGCG
ATAGAAGACA TGAGGCAGCA AGTGATTAGC TTGCTCTAA
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| Protein sequence | MKKTLKKLMT MLAAVQLYLV LALFGSSVAL AQMPVLKGIG GEFSLKSSKG GEVSLSDFKD
KVVLMFFGYT NCADICPTTM AHISQMMNKL TPEQRSRVQV LFVSIDSDYD TPKHLNKYLA
YFDPSFIGLV DEREKIDYVA KLFHADYIKL ANDKVTTEFK KLSLDDEKQE QKGYLYSHSA
KIFVMDTHSR VRGFFYAGTA IEDMRQQVIS LL
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