Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3445 |
Symbol | |
ID | 4019993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4117736 |
End bp | 4118752 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637957497 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_564443 |
Protein GI | 91794792 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTA CTACAGTTGG TTTAGATATC GCAAAGTCTG TTTTTCATTT TGTTGGTGTA AACAAAGCGG GAAAACTAGT CAAAAAGAAG ATGATAAAGC GTAAAGACTT GCTCCACTTT CTTGCTCAGA TAGAGCCCTG CCTGGTCGTC ATGGAAGCCT GTGGTGGAGC AAATTACTGG GCAAGGGAAT TTGAGAAAGT AGGCCATCAA GTCAAATTAA TAGCACCTCA GTATGTTGTT CCCTACAGGC AGGGAAATAA AAATGACTAT AACGATGCAC TTGCTATAGC GGAAGCAGCC CAAAGACCTA ACATGCGCTT TGTACAACCT AAGCCCGCAG AGCAACAAGA TATTCAGATG TTACACCGAA TGAGAGAAAG GCTTAGCAAG CAGTCTACTG CACTGGTTAA TCAGGTCAGA GGAATGCTCG CTGAGTACGG GATTGTCATC ACAAAAGGAA AAGCGTCTTT TAGGTCAAAA CTGCCAGATA TTCTAGAAAA CGCCGACAAT GAGTTAACCG CCAAAGGTAG AAGCATTTTC TATCAACTGT ACGAAGAGTT TAACGGTATC GAGGAGCGGC TTAAACGCTG TGACAATCAG GTGCAGCAAG AGACGAAGAA CAATCATGTA TGTCAGCGTT TAGAAAGTGT ACCAGGTATC GGTCCTGTAA CAGCAACTGC ATTTTATGCC GCAGTAGGAG AAGGCAAAGA CTTTACTAAT GGCAGGCATT TTTCTGCATG GTGCGGCCTA GTGCCAAAAC AGCACAGCAG TGGCGGTAAA GATAATTTGC TGGGGATCAG TAAACGCGGC AATGCTTATC TTCGAACTTT ATTTATCCAT GGAGCAAGAG CTGTCCTTTA CCATAGTGAT GGTAAAGGAG ATAGATTTAG TCGCTGGGCA ATAGCACTTG CAGAAAGGCG AGGATTTAAC AGAGCTTGCG TTGCAGTGGC TAACAAGCTA GCGCGAATAG CATGGGTCAT TGCAGCAAGA GAGGATGAAT ATCGGATGGC AGTATAA
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Protein sequence | MKITTVGLDI AKSVFHFVGV NKAGKLVKKK MIKRKDLLHF LAQIEPCLVV MEACGGANYW AREFEKVGHQ VKLIAPQYVV PYRQGNKNDY NDALAIAEAA QRPNMRFVQP KPAEQQDIQM LHRMRERLSK QSTALVNQVR GMLAEYGIVI TKGKASFRSK LPDILENADN ELTAKGRSIF YQLYEEFNGI EERLKRCDNQ VQQETKNNHV CQRLESVPGI GPVTATAFYA AVGEGKDFTN GRHFSAWCGL VPKQHSSGGK DNLLGISKRG NAYLRTLFIH GARAVLYHSD GKGDRFSRWA IALAERRGFN RACVAVANKL ARIAWVIAAR EDEYRMAV
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