Gene Sden_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3441 
Symbol 
ID4019989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4112463 
End bp4113731 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content48% 
IMG OID637957493 
Producthypothetical protein 
Protein accessionYP_564439 
Protein GI91794788 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0291349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCTA ATCTTAGCCT AGCCATTTAC AAGAGTGATG ACAAGCCTGT GGACAATCAA 
CAGTTTATTG AGAAACGTAG ATTTATCATC AAACTAGGCA AAGCGCTACA TAAGTTCGGT
ACTCCAGCTT ATCGCCTCGA GTCACACCTG CAGACCGTAT CATCGAGTTT GGGCATTGAA
GGCTACTTTT TAATTTCTCC CACCTCCATG ACCTTCGTGC TACAGCATGA TTCGGAGCAA
GAATACAATC ATGTGGCTCG TGTAAAACCA GGGGATCTTG ATCTTGGTTC ACTGGCCCGT
ACCTTCGAGT TAGTTGAGCA GTTAAGCTCA GGTCAAAGAA CACTGCAAGA AGCCTTAGAC
AGGCTTGAAG AAATCGCCAA TAAACCCAAC CCCTATGGCC ATAAGCTAAC CATGCTAGCT
TTTGGTACCA GCGCAGGGGC TTTTGCCATG TTAATGGGCA CCGGCTGGCA TGATGTATTT
TGGTCTGCCA TGTTAGCCTT AATGGTTTAC AGCTTAGTTT TTTGGGCCGA ACGCTCAAAG
CGAGTCGCTG AGATGCTCGA GCCAATGGCG GCGGTCTTAT GTGCCATTTT GGCCTGCGGG
ATAGCTAAGA TAGACCCCAG CATTAACCTG CCTGTGGCCA TCTTATCTGG AGTGATTATT
TTTGTCCCTG GCCTAGCGCT CACCTTAGGG CTTGCCGAAC TTGCCGCCCG TGATTTAATT
TCGGGGACAG CGCGCATCAT GGACGCCATA ATGCAATTGT TTAAATTGTA TTTTGGCGGC
GTATTGGGCA TGACCATTGG CAAGGCTATT TTTGGTGATG CCATTTATAT CGATCCTGAG
CCTCTGCCAC GTTGGGCTAT ATGGTCAGCC GTGCCCATGC TATCAATGTC ACTGGTTATC
ATCTTTAAAG CTCGTTTGAG GGATTCTCCT TGGGGGGTAT TCGCTGGGAT TGTCGCCTTC
TTCTCCGCGA TGTTAGGGGG GATTTACTTA GGGGAGTCCA TTGGCATTTT TGTCGGTGCC
TTAGCGGTTG GTGTTTACTC CAATCTTTAT GCGCGTTGGA TGAAAGCTCC CGCCTCCATA
GCGCTACTAC AAGGCATAGT GATCTTGGTG CCGGGAAGTA AAACCTACAT TGGCCTTAAT
ACCCTTATCT CAGGTGAAAC CATGCTCAAT CAGAGCCATT TAGGCTCGCA AATATTCTTG
ATTTTTATGT CACTTATCGC CGGGCTCATA TTTGCTAACG TGGTTGTTCC CCCGAGACGC
AGCCTGTAG
 
Protein sequence
MRANLSLAIY KSDDKPVDNQ QFIEKRRFII KLGKALHKFG TPAYRLESHL QTVSSSLGIE 
GYFLISPTSM TFVLQHDSEQ EYNHVARVKP GDLDLGSLAR TFELVEQLSS GQRTLQEALD
RLEEIANKPN PYGHKLTMLA FGTSAGAFAM LMGTGWHDVF WSAMLALMVY SLVFWAERSK
RVAEMLEPMA AVLCAILACG IAKIDPSINL PVAILSGVII FVPGLALTLG LAELAARDLI
SGTARIMDAI MQLFKLYFGG VLGMTIGKAI FGDAIYIDPE PLPRWAIWSA VPMLSMSLVI
IFKARLRDSP WGVFAGIVAF FSAMLGGIYL GESIGIFVGA LAVGVYSNLY ARWMKAPASI
ALLQGIVILV PGSKTYIGLN TLISGETMLN QSHLGSQIFL IFMSLIAGLI FANVVVPPRR
SL