Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3441 |
Symbol | |
ID | 4019989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4112463 |
End bp | 4113731 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957493 |
Product | hypothetical protein |
Protein accession | YP_564439 |
Protein GI | 91794788 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0291349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCTA ATCTTAGCCT AGCCATTTAC AAGAGTGATG ACAAGCCTGT GGACAATCAA CAGTTTATTG AGAAACGTAG ATTTATCATC AAACTAGGCA AAGCGCTACA TAAGTTCGGT ACTCCAGCTT ATCGCCTCGA GTCACACCTG CAGACCGTAT CATCGAGTTT GGGCATTGAA GGCTACTTTT TAATTTCTCC CACCTCCATG ACCTTCGTGC TACAGCATGA TTCGGAGCAA GAATACAATC ATGTGGCTCG TGTAAAACCA GGGGATCTTG ATCTTGGTTC ACTGGCCCGT ACCTTCGAGT TAGTTGAGCA GTTAAGCTCA GGTCAAAGAA CACTGCAAGA AGCCTTAGAC AGGCTTGAAG AAATCGCCAA TAAACCCAAC CCCTATGGCC ATAAGCTAAC CATGCTAGCT TTTGGTACCA GCGCAGGGGC TTTTGCCATG TTAATGGGCA CCGGCTGGCA TGATGTATTT TGGTCTGCCA TGTTAGCCTT AATGGTTTAC AGCTTAGTTT TTTGGGCCGA ACGCTCAAAG CGAGTCGCTG AGATGCTCGA GCCAATGGCG GCGGTCTTAT GTGCCATTTT GGCCTGCGGG ATAGCTAAGA TAGACCCCAG CATTAACCTG CCTGTGGCCA TCTTATCTGG AGTGATTATT TTTGTCCCTG GCCTAGCGCT CACCTTAGGG CTTGCCGAAC TTGCCGCCCG TGATTTAATT TCGGGGACAG CGCGCATCAT GGACGCCATA ATGCAATTGT TTAAATTGTA TTTTGGCGGC GTATTGGGCA TGACCATTGG CAAGGCTATT TTTGGTGATG CCATTTATAT CGATCCTGAG CCTCTGCCAC GTTGGGCTAT ATGGTCAGCC GTGCCCATGC TATCAATGTC ACTGGTTATC ATCTTTAAAG CTCGTTTGAG GGATTCTCCT TGGGGGGTAT TCGCTGGGAT TGTCGCCTTC TTCTCCGCGA TGTTAGGGGG GATTTACTTA GGGGAGTCCA TTGGCATTTT TGTCGGTGCC TTAGCGGTTG GTGTTTACTC CAATCTTTAT GCGCGTTGGA TGAAAGCTCC CGCCTCCATA GCGCTACTAC AAGGCATAGT GATCTTGGTG CCGGGAAGTA AAACCTACAT TGGCCTTAAT ACCCTTATCT CAGGTGAAAC CATGCTCAAT CAGAGCCATT TAGGCTCGCA AATATTCTTG ATTTTTATGT CACTTATCGC CGGGCTCATA TTTGCTAACG TGGTTGTTCC CCCGAGACGC AGCCTGTAG
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Protein sequence | MRANLSLAIY KSDDKPVDNQ QFIEKRRFII KLGKALHKFG TPAYRLESHL QTVSSSLGIE GYFLISPTSM TFVLQHDSEQ EYNHVARVKP GDLDLGSLAR TFELVEQLSS GQRTLQEALD RLEEIANKPN PYGHKLTMLA FGTSAGAFAM LMGTGWHDVF WSAMLALMVY SLVFWAERSK RVAEMLEPMA AVLCAILACG IAKIDPSINL PVAILSGVII FVPGLALTLG LAELAARDLI SGTARIMDAI MQLFKLYFGG VLGMTIGKAI FGDAIYIDPE PLPRWAIWSA VPMLSMSLVI IFKARLRDSP WGVFAGIVAF FSAMLGGIYL GESIGIFVGA LAVGVYSNLY ARWMKAPASI ALLQGIVILV PGSKTYIGLN TLISGETMLN QSHLGSQIFL IFMSLIAGLI FANVVVPPRR SL
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