| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3385 |
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| Symbol | |
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| ID | 4019933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4039404 |
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| End bp | 4040387 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957438 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_564384 |
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| Protein GI | 91794733 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTTT TTTCGCTGCT TATCGCCATC TTAGTCGAGC GTTTGCGTCT GCTGCCCAGT
CAGTGGCAAT TTGATGCATT AATGCAAAGC TATCATAAGC GCTTTTGGGA TCGGGATTCA
TTAGCTTCTA CCAGTGGCGC CTTGTTAGCC ATGGCATTGC CAGCGATTAT CTTAGGGTTA
ATCTTGTATT TGCTCGATGG GTTATTTTTC GGATTATTTA ATTTGCTCGC GTGGATTTTT
GTGTCTGTTA TCTGCTTTAG CCACCAAAAC CTCAGAGATA CCTTTAAAAA ATATATCCAA
GCGGCGTGTC GCAGTGATGT GCAAGCAAGC TTTCGCTATG CCAGCGAACT CGATTGCTGT
GAGTGTCTCG ATGCGGTAAA TGAACGTGAC TTAGGTGCCA AGGTCGGGCA AATATCGGCC
TGGATCAACT ATCGCTACTA TGGCGCGGTC GCGTTATTTC TTATTTTCTT AGGCCCAGTG
GGTGCCGTCT TGTACTGCAC TGTGCGTTAC TATAGTCAGC GAGAATTAAG TCTTAATAAT
CAATTACAAC ATTGCCAAAC GGCTAAGCAA GCGCTGCTAG AACAAGGTGT TGTAGCTGAC
AATGCCGAGC TTGCAGATGA ACCGAGCCAT ATTAAGATGC CGTTAGTGCA AGAAATTCAA
AAGTTATTGG ATTGGCTGCC CAGTCGTATT TTTAGTTTTG GTTTCGTATT GAGTGGCCAG
TTTTCATCGG GAATGCTGAT TTGGCGTAAG CTGGCACTGC AATGGCATAG TGGTGCTAAA
ACCTTGATTA CCGAGACAGC CTTAGCCTCA GAGGCGAGTA TAGTGTCCGA AATGCTTGCC
GATGACACCC TAGATAGCGA CTCTGCTAAA AATGCCCCTC TGAGCGTGCG TGAAACCTTG
GCGCTACTTG AACTCAGTAA GCGTAACTTT ATCCTGCTAC TGACGGTATT GTCTGTGCTC
ACTATTTTTG GCGTGGTCAG TTAG
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| Protein sequence | MALFSLLIAI LVERLRLLPS QWQFDALMQS YHKRFWDRDS LASTSGALLA MALPAIILGL
ILYLLDGLFF GLFNLLAWIF VSVICFSHQN LRDTFKKYIQ AACRSDVQAS FRYASELDCC
ECLDAVNERD LGAKVGQISA WINYRYYGAV ALFLIFLGPV GAVLYCTVRY YSQRELSLNN
QLQHCQTAKQ ALLEQGVVAD NAELADEPSH IKMPLVQEIQ KLLDWLPSRI FSFGFVLSGQ
FSSGMLIWRK LALQWHSGAK TLITETALAS EASIVSEMLA DDTLDSDSAK NAPLSVRETL
ALLELSKRNF ILLLTVLSVL TIFGVVS
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