| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3375 |
|---|
| Symbol | |
|---|
| ID | 4019923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 4018412 |
|---|
| End bp | 4019110 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637957428 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_564374 |
|---|
| Protein GI | 91794723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAT CTGCTAGCTC AAGCTTATCT ATGCATGAGG CAGCTTGTAG CAAGAGTCAC
TCCCAAGCGC ATAGGGATTG TCCAACTCAG TTAGCTATTT TTCCATTACC AATATTTCTT
TTGCCTTCAG GTATTACCCG ATTACGAATA TTTGAACCTA GATATCTCAC TATGATTTCA
ACATCAAGTG ACGGTAGAGG CTTTGTGATC GCAACTTGTG ATAAAGGCAC TGAAGCCCAG
CTGCCAAAAT GGGGGGCAAG AGTGCAAGTT GTGGATTTTC ACACAGACAA TGGTGTGCTC
GTGATTGATG TACAAGCGGT ACATCTAGTG TCCTTGGGTG ATACCAAGCG CCAAAATGAT
GGCTTACTCA TCGCAGATGT CCAATACCTT GACCATTGGG CAACATTAGA GAAACCTGCA
GCTGGAGGAT GTTCATTAGA GATTCAAGCA CATCAGCATC CCAGTGAGCA GATGAACGCT
TTGGTGCATG TACTTAAGAA AATAGTTTCC CAACATAGTT TACTCAGCAA TGTTTATCAA
AACTTGTACT TAGCGTCGCC CCAATGGGTT TGTGCTCGCT TTTTGGAGAT ATTGCCATTA
TCTTTGAATG AGAAAGAAAA ATTCATTGAA CCTAGGGCCT TAGAGCATAT TCAATCCTTT
CTCTTTACCT TAGTTTTGGG TTCGGAGATT TATAATTGA
|
|---|
| Protein sequence | MIKSASSSLS MHEAACSKSH SQAHRDCPTQ LAIFPLPIFL LPSGITRLRI FEPRYLTMIS
TSSDGRGFVI ATCDKGTEAQ LPKWGARVQV VDFHTDNGVL VIDVQAVHLV SLGDTKRQND
GLLIADVQYL DHWATLEKPA AGGCSLEIQA HQHPSEQMNA LVHVLKKIVS QHSLLSNVYQ
NLYLASPQWV CARFLEILPL SLNEKEKFIE PRALEHIQSF LFTLVLGSEI YN
|
|---|
| |