| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3373 |
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| Symbol | |
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| ID | 4019921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4017046 |
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| End bp | 4017720 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957426 |
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| Product | anti-sigma factor ChrR, putative |
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| Protein accession | YP_564372 |
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| Protein GI | 91794721 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATCA TGATTAATTA CCACCCGCAC AAGCCAGTAT TAACAAGTTT TGTTGATGGA
GACTTGCCTG CATCCATTAG TATCATGATT GCCAGCCACG TGGAGCTTTG CGCCCAATGT
AAAACGCAAG TTCAGCTGTT GACAGATCAA GCCGCCATGG TCCAATTCGA ATCCAATGCC
GAAGACTTTG ATACTTCAGA CATGGATTTA GATGCTTTGG CTATGATAGA TACTATTACC
CAAATAACGG CAGATAATCA CGACTCCCTG CCTCAAACTG TGACTGAAAT CGCCATTGCA
GGGCAGCGGA TCCCCTTACC CAGAGCCCTT AAGTCTGTGG CACTAAAACC CTGGCAAGGT
CTAGGGAATT TATCCCGTGC GCGGCTCGAC CTTCAAGACG ATGAGCGGCG TATGAGTCTG
CTGTATATCG CACCCGGTGG CAGTGTTCCC CGTCATACCC ATCAAGGTTT TGAAATTACC
TTGTTATTAC AAGGAAGTTT TGAAGATGAA ATGGGCCAGT ACCACACCGG CGATTTTATC
TGGCTCGATG GCAACCACAC CCATCAACCT GCCACCGCAG ATGGCTGCGT GTGTTTGACC
GTTTCCAGTG ATGCCATTCG TTTCACTCAA GGCATGAGTC AGTTGCTTAA TCCCATAGGT
AAATTTATTT ATTAG
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| Protein sequence | MNIMINYHPH KPVLTSFVDG DLPASISIMI ASHVELCAQC KTQVQLLTDQ AAMVQFESNA
EDFDTSDMDL DALAMIDTIT QITADNHDSL PQTVTEIAIA GQRIPLPRAL KSVALKPWQG
LGNLSRARLD LQDDERRMSL LYIAPGGSVP RHTHQGFEIT LLLQGSFEDE MGQYHTGDFI
WLDGNHTHQP ATADGCVCLT VSSDAIRFTQ GMSQLLNPIG KFIY
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