| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3337 |
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| Symbol | |
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| ID | 4019885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3980127 |
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| End bp | 3980963 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957390 |
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| Product | MSHA biogenesis protein MshO precursor |
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| Protein accession | YP_564336 |
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| Protein GI | 91794685 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.131781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGTC GCACAACAGG ATTCACCTTG GTTGAATTGG TCACCGTTAT CTTAATTTTA
GGGGTGATGG TGATTGGCGT TAGTGGCTTT ATTATTTTTG GCACCCGTAT TTTTGTTGAG
TCATCTTCGG TGGATCAAGT GCTAGGTCAG AGCCGCTATG CTATAGAACG CATGACCCGA
GAACTAAGAG GCGCCGTGCC TAACAGTGTG CGCCTCAGTA ATAATGACAA CTGGCAATGC
CTAGAGTTTG TGCCCATTGA AGCCAGTACT TCTTACTTAA CGATGCCGAT AGCCCCGGAT
ACACCAGCGG CGAATACTGG CACTGTGATT ATTGATGATC CTGATAATAG CCAGATAAGT
GCAGGCCAAT GGGCCTTGAT TTATCCCTTA ACTGACACAG AGGTTTATGA CGTCAGCGAG
GCAAAGCGCT TTCAGCTCGC GAGTGTGGCT GTATTAGCAG ATGCCTTAAC CTTAGGTTTT
GCCACTCAAG TGCGTTTTGA ACAGGCATCC CCCAGGCAGA GGGTGTACTT TGCCAGCCAA
GCCGTGAGTT ACTGTTTCGA GCAATTAGTG GCAGGTGTAC CCGGCGATTT GTATCGCTAT
TCGGCCTATG GTCTACAGCA GACTCAACCC AACCCCAATA CTATGCCTGT TACTCGGGTG
CGTTCCTTAA TGGGGCAAAA CATCATTAAT GAACTCAGTA TTAATGCAGA CTTACCTCTA
TCTCTGACAC CTTCAAGCTT AATGACTAAT GCCATAGTGC AATTGCAGCC TAGGTTTCGC
GTGCTTGGGG AAACTTTTCA ATATCGCCAC CAAGTGCAGG TGATCAATGT CCCTTAA
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| Protein sequence | MRSRTTGFTL VELVTVILIL GVMVIGVSGF IIFGTRIFVE SSSVDQVLGQ SRYAIERMTR
ELRGAVPNSV RLSNNDNWQC LEFVPIEAST SYLTMPIAPD TPAANTGTVI IDDPDNSQIS
AGQWALIYPL TDTEVYDVSE AKRFQLASVA VLADALTLGF ATQVRFEQAS PRQRVYFASQ
AVSYCFEQLV AGVPGDLYRY SAYGLQQTQP NPNTMPVTRV RSLMGQNIIN ELSINADLPL
SLTPSSLMTN AIVQLQPRFR VLGETFQYRH QVQVINVP
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