| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3329 |
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| Symbol | |
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| ID | 4019877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3965942 |
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| End bp | 3970201 |
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| Gene Length | 4260 bp |
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| Protein Length | 1419 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957382 |
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| Product | hypothetical protein |
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| Protein accession | YP_564328 |
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| Protein GI | 91794677 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAACAC CGACGCTGCA ACGACTCATC AAAATAGTGT GGCAGCTGCT GGCCTTAGGC
CTGTTGCTGT TTGCACTCTT GGTGAGTTTA ATTCGCGGCC TCTTGCCCCA TGTCCCCGAG
GTGCGTCAGC AACTGGTTGA GTACCTGCAA CATCAATATA AAGTTAAGGT GCAGCTTGAG
AGTATCATGG CCCAGTGGCG TGCCTTTGGT CCTGAACTCG TCATTAATCA ATTAGTTATT
CCTCCTCAGG CTGCCTTACC CATCACCTTG ATGGTGGAAA AAGTACACTT AAAAATCGAT
TTCTGGGACT CAGTGGCCAG CTTTTCGCCA CAAATAGAAA CGGTTACCTT CGATGGCTTA
CACTTAGCCT ATGACTTAAG TCATCAGGCC ATAGCCCCAT CAGCATCACC CGCGGCCATG
GATTCAGAAG GTACCCATGG TCCAGCCATA GCATCAGAAG AAGCCCAGGC TCAAGACTGG
CTCTATGGCT TTGCCCTCGA GCAGCTGAGT CACTTTTCTA TTACCAATGC GTCGGTGCAA
CTCTTAAGTG ATAAGCGCAA GTTTAAGCCG ATTTTTATTA ATAACTTAGT CTGGTTAAAT
AGCCCCAATC TTCATCGCGG CGAAGGTCAG CTGTTGATGG ATAAATCAGG GGCATCCCAA
CAGAATTTGT CCCTGAAACT TGAAATTAGC GGTAATGGCT ATCAAGCCGA CTCCTTGGTG
GGTCAGGCTT ATCTACAGGC TAACGAGTTA GATCTCGGCC AATGGCTTAG TGGCAAGGCT
GCTGAATTGG ATTTTAAACG CTTGCTGCAA GTGGCCAATT TAGACTCAGA ACCTGAGCAT
GCTAAAATCG ACGGAAAGCT TAACTTCGAG GCTTGGCTTG AGTTTAGCAA TCGCAGTCTA
GCCTCGGGAT TATTAGTATT AAAACCCAGC TCATTACAAT GGCAATGGGC TGACGTGACC
GAGCGGTTTT CTATCGAATC AGGCCAGTTT GAACTTGTGT CTTCCCCTGA AGGTTGGCAA
GTAAATAGCC ATGGGCTTAA GCTGATGACT AATCAGCAAG TGTGGCCAGC ATTGGATATC
GGCGTACGCT ATCAAGATGA TGCATTCTTT GCCTATCTCA ACGAGCTGAG TCTACCGCTG
TTGACGCCTT TGCTGGCATT GGTGCCTGAG CTAAGCGCGG AGCAATTAAC TCAGTGGCAG
ACGCTCGGCT TGTCGGGCAC GGTTGGACCC ATTCGCGGCT ATCACAGTCT TGAAACGGGA
TTGATTGCCA AAACCAGGCT GAGCCAAGTT GCGTGGAGTC GAGCAGAGGG CATGCCGGGC
ATGAGCCCCA TAGACGCCGC GTTAAGCTAT GACAATCATG GCCTTAATCT TAGTTTGCCA
GCACAGGATT ATAGTCTGGA CTTTGGCACA GGTTTTGAGG CGCCATTAGT TTTTCATGGT
GAGGCCTTGA GTGCGCGCTA TGAGTTAAGC GAGCAGCGCT TAGCTATCCC TAGATTTGCA
TTCGATAATC AAGACATTAG CTTGGCGGGG GCAGTTGGCG TGAGTCTTAC ACAAGACACG
CACCTGAGTC TGGCGGCCAA GGTTAAGGTC AAGCAAGCAC AGCATCTTGG GGATTATTTT
CCCTTAGCCG CCATGAGTCC CGAACTGGTC GAGTATCTTA ATGGCGCCAT CATTAAAGGG
CAGATCCCTG ATGCCAGTGT GGTTTGGCAT GGCGCCTTAA GTCACTATCC TTATGAGGAT
AATTCCGGGG TGTTTCAGGC GGGTTTTACC CTAGAGAATG CGGTTTATCG TTTTGAGCCC
GACTGGCCGG TCATTACTGA GCTGCGTCTG GACGCCTTAT TTGAAAATGC CGCCATGGAT
CTGTGGGTGA CACAAGGCCA ATTACAAGAT GTGGCCATCG ATGGTGCCCA TGTGTATATT
CCAGAACTTG GCGAAAATAG CCTGTTGCGA GTAGAAGCCA AGCTTAATAC GCAGGCCCTT
GCGGCTACTC GAGTGTTGCA GGCATCCCCT CTGAAAGACT CAGTAGGTGA AACACTCAAT
AGCCTGCAGG TTAGGGGCGC TATTTCTGCG AGGCTTGATC TTAATATCCC ACTCTATGAG
GGTGAAGAAG AACGCATTGC GGGCAATATC AGCTTTAATA AGAATAACTT GTTGCTAACT
GGCCCTGAGC TTGAGTTCAC TGATTTGACC GGCGAGGTGA GCTTTATTAA CCAAGAATTG
TTAGGTAAAG GCCTGAAAGC CAAGTTACTC GGGCAGGGAT TAGTGTTTTC CTTTGCCACA
GAGGAGCGTG ACGACAAGCT GGCGCTCGCG GTGGACCTGC AGGGCAAGGT GGTGATGGCA
AGTTTGCCAC AGGCGGCAGC CAATCCACTG TCCGAATATT ATCAAGGTTC ATTTGAATGG
GATGGCGCCA TGAGCATGGT GTTTGAACCC GATAATTATC AGCTGCAATT ACAGCTTAAT
AGTGACTTAG TGGGCACAGA AATCAGCCTG CCGGCGCCAT TCAATAAACC TGTAAAAGTG
CCTTTAGGAC TAAACCTTGA GTTATTCGGT GAGAGTCAGT CGATCACATT CAGTGCAAAA
TTGGCCGAGT TGGCCGAATT TAGGGGGGAA ATAACCCCAG AGAGCGGCAA TGGCTTGAGT
CATTATGATG TAATGCTAGG CCGAGCATTT AAGCTTGGAG ATACGCTGCA AGGGCAAGGG
CAAGGGCAAA TTCAAATTGC CTTAGACCAG GCCCAGCTTG CCCCTTGGTT GCCTGTGATT
GAACAGTTTA CCTTAGCGAG CACTGAACCC ACTGGCGAAG AGGCTGAGCC AGGGTTTTTC
CCCCCATTGC AATTAATTCG CGGCAAGGTT AATCAATTCG AATTACCCGG GTTATGGCTT
CACGCTGCAG AATTTAGTGC ATCGCCTTCA GCGGACAAAT GGCAGTTTAA GGTTGATTCA
GAAGAGTTTG TTGGTGACAT CAGCCTCTAT CCCGACTGGC AACAACAAGG CTTGGAAGTA
CAGGGTGAAA AGCTTGCCTT GAGCACACAA GCGCTTGGAC TTAAGCCCGA GAAGCATATC
GAAGCGAGCG CGCCAATGCT GCCGCTCGAG TTAAATCCCC TTGAAGCAGA CTCGGATCCA
GTGACTCTTG GTTTAAACCC AGCGTCTCAG GCTGTTGAAG TACCCGCACC CAGTAGCACA
GATATTGCGG CTTCTAGCAC AGTCCTTTTA CCTAAGGTTG AATTCAAAAC AGCCTTAATC
GACTTGCCTA AACTTAAGAT AGATGTCGCA GACTTTAGTT TCAATGGCAT GCCATTAGGG
CAATTGCAGC TCGAGGGTGC CCATAACGAG TTAGGTTATC AGTTCAGCCA CATAGGCTTA
ACTAAGCCTG GCTTGATTTT TAACGCCACA GGTTTGTGGT CTTTAGTTGC AGGGCAAGAG
CGCAGTGAGT TTGAACTCGA TCTGCAAGCG GATAAGTTTG ATATCCTGTC AGAATCTTTA
TTGATAGAAC CGGGTGTTAA GGATTCACCT GTGAAGCTTA AGGGCAATCT TAGCTGGCAG
GCAGCCCCCC ATGAGTTTGT GTTGTCAGCG CTGGATGGGG CTTTAGCGTT TGAGCTGGGT
AAGGGGCACT TATCTGAAAT TAGTGATAAA GGCGCGCGGA TATTTTCCTT GTTCAGTTTA
GATTCTTTGC TGCGCAAATT ATCTTTTGAT TTCTCGGATG TATTTGGCCA AGGATTATAT
TTCAACGAGT TTAAGGGCGA TCTCACCATA GATAAAGGTG TGCTTAAGAC CCGTAACACA
GAAATGGATG CTATAGCAGG CGATATGAAG GTGCGGGGCT ATACTGATTT AAGCAGCCAA
AGCTTAAATT ATGATATTCG TTTCGTGCCT CAGTTAGCGT CAAGTGTACC GACTGTGGTG
TTACTCAGTA CCAGTGCCTG GACATTTGGT GTTGGTGCGT TTGCGCTAAC TAAGGTGCTT
GAACCTATGA TAGAGATTAT TTCTGAAATT CGCTTTCGGG TGACGGGCAC CATGGATGAG
CCTCTCATCG AAGAGTTGGA GCGTAAGCAT AAAGAAATTG AGATCCCCGA AGCGATTTTA
GCCCCCAAAG TGGGCGCACA GACCCAAGAG ACACTTGAAA GTGGTGAGCC TGTTGATGCC
TCAACCCTGT CACAGGGTCA AACTAAAGCG CCAACCCCGG CTAAACCAAT CGCTGATGAT
GTATCGTTGG ACGTCCCCGC GTTGGTGGAA AAGCCTGAAA CCCAGCCAGT GCCAAGATAG
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| Protein sequence | MSTPTLQRLI KIVWQLLALG LLLFALLVSL IRGLLPHVPE VRQQLVEYLQ HQYKVKVQLE
SIMAQWRAFG PELVINQLVI PPQAALPITL MVEKVHLKID FWDSVASFSP QIETVTFDGL
HLAYDLSHQA IAPSASPAAM DSEGTHGPAI ASEEAQAQDW LYGFALEQLS HFSITNASVQ
LLSDKRKFKP IFINNLVWLN SPNLHRGEGQ LLMDKSGASQ QNLSLKLEIS GNGYQADSLV
GQAYLQANEL DLGQWLSGKA AELDFKRLLQ VANLDSEPEH AKIDGKLNFE AWLEFSNRSL
ASGLLVLKPS SLQWQWADVT ERFSIESGQF ELVSSPEGWQ VNSHGLKLMT NQQVWPALDI
GVRYQDDAFF AYLNELSLPL LTPLLALVPE LSAEQLTQWQ TLGLSGTVGP IRGYHSLETG
LIAKTRLSQV AWSRAEGMPG MSPIDAALSY DNHGLNLSLP AQDYSLDFGT GFEAPLVFHG
EALSARYELS EQRLAIPRFA FDNQDISLAG AVGVSLTQDT HLSLAAKVKV KQAQHLGDYF
PLAAMSPELV EYLNGAIIKG QIPDASVVWH GALSHYPYED NSGVFQAGFT LENAVYRFEP
DWPVITELRL DALFENAAMD LWVTQGQLQD VAIDGAHVYI PELGENSLLR VEAKLNTQAL
AATRVLQASP LKDSVGETLN SLQVRGAISA RLDLNIPLYE GEEERIAGNI SFNKNNLLLT
GPELEFTDLT GEVSFINQEL LGKGLKAKLL GQGLVFSFAT EERDDKLALA VDLQGKVVMA
SLPQAAANPL SEYYQGSFEW DGAMSMVFEP DNYQLQLQLN SDLVGTEISL PAPFNKPVKV
PLGLNLELFG ESQSITFSAK LAELAEFRGE ITPESGNGLS HYDVMLGRAF KLGDTLQGQG
QGQIQIALDQ AQLAPWLPVI EQFTLASTEP TGEEAEPGFF PPLQLIRGKV NQFELPGLWL
HAAEFSASPS ADKWQFKVDS EEFVGDISLY PDWQQQGLEV QGEKLALSTQ ALGLKPEKHI
EASAPMLPLE LNPLEADSDP VTLGLNPASQ AVEVPAPSST DIAASSTVLL PKVEFKTALI
DLPKLKIDVA DFSFNGMPLG QLQLEGAHNE LGYQFSHIGL TKPGLIFNAT GLWSLVAGQE
RSEFELDLQA DKFDILSESL LIEPGVKDSP VKLKGNLSWQ AAPHEFVLSA LDGALAFELG
KGHLSEISDK GARIFSLFSL DSLLRKLSFD FSDVFGQGLY FNEFKGDLTI DKGVLKTRNT
EMDAIAGDMK VRGYTDLSSQ SLNYDIRFVP QLASSVPTVV LLSTSAWTFG VGAFALTKVL
EPMIEIISEI RFRVTGTMDE PLIEELERKH KEIEIPEAIL APKVGAQTQE TLESGEPVDA
STLSQGQTKA PTPAKPIADD VSLDVPALVE KPETQPVPR
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