| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3300 |
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| Symbol | |
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| ID | 4019848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3929601 |
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| End bp | 3930113 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637957353 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_564299 |
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| Protein GI | 91794648 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTG TGTTAGATAC ACACATATTC AAACAGATCA CCCTCCAGCC CGGGGAATTT
CATTTTGCCC AAGGAAAAAT CAGAATAAAC ACATTATTAG GCTCTTGTGT TGCCATTACC
TTATGGCACC CCGATAAACA TCTTGGGGGT ATGTGTCATT ATATGCTGCC AAAAAGCAGC
CAGACCCAGC GTTTAGAACC AGGTTTCTTT GCCGATGGTG CTATGAAGTT ATTCCTTGAT
GCCATTAAAC TGCACCACAC CCAGCCAGAG GATTATCACG TCAAACTTTT TGGTGGTAGT
AACATGTTTC GTCAGCTCAA TAGTCATCAT CATTTCCTCA ATGTAGCGGA GAAAAATATT
GCCGCTGGAC TAAAATTACT AAAACAAAAC GGTTTTCACA TTCAGAATAT GGATTTAGGC
GGTGCTGTTC ACAGGCAAGT TTACTTAGAG CTATGGAATG GGGATGTCTG GGTAAAATAT
GGTGGGATTG AGACTGCTAG AGACACATTA TGA
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| Protein sequence | MNTVLDTHIF KQITLQPGEF HFAQGKIRIN TLLGSCVAIT LWHPDKHLGG MCHYMLPKSS
QTQRLEPGFF ADGAMKLFLD AIKLHHTQPE DYHVKLFGGS NMFRQLNSHH HFLNVAEKNI
AAGLKLLKQN GFHIQNMDLG GAVHRQVYLE LWNGDVWVKY GGIETARDTL
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