| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3288 |
|---|
| Symbol | |
|---|
| ID | 4019836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3914677 |
|---|
| End bp | 3915105 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637957341 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_564287 |
|---|
| Protein GI | 91794636 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0997819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA GCGATATCAT GACCACAACC CCAGTGTGTA TCAGTAATGA AGCTACCCTC
AAAGATGCAC ATCAATTAAT GCAAAGCCGC AGCGTACGCC ACTTGCCTGT CATATCTGAA
TTAGATGGCA CTCTAGTAGG TATGCTGACA CACAAGAAGA TGATCGCCAG CGTGTTAAGC
ATGCTCAATA AATACGGCCA AGGAGCCTTA GACAGGAAAG AGCGTTACAA ACCCATTATC
GAGGTGATGG AAACCCAAGT ACAGAAACTC GGTTTAGATG AACCATTATC TGTCGTGGTA
CAGTACTTTA TTGATAATAA ATTAGGCTGT TTACCCGTTG TAGATACCAG TAACAAAGTC
ATAGGCATAG TCACTTCATC GGATTTTGTT AAGTTGTGCC AACGCTTGTT ACTCAAGCAT
CCAGACTAA
|
|---|
| Protein sequence | MKVSDIMTTT PVCISNEATL KDAHQLMQSR SVRHLPVISE LDGTLVGMLT HKKMIASVLS
MLNKYGQGAL DRKERYKPII EVMETQVQKL GLDEPLSVVV QYFIDNKLGC LPVVDTSNKV
IGIVTSSDFV KLCQRLLLKH PD
|
|---|
| |