| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3256 |
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| Symbol | |
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| ID | 4019785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3890791 |
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| End bp | 3891270 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957309 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_564255 |
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| Protein GI | 91794604 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0715149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA AATCTCAATT AGCTGCCCTT GGTTTAACGG GGTCTTTATT GTCTGGCGCT
GTGCTTATTG CGGTACATGA GGGTGAAATT CATCACACTT ACCTCGATCC CGTTGGGGTT
AGCACAGCTT GTTTTGGGCA TACAGGTAAA GACATCAAAG TTGGCATGGT ATTCAGCCGC
GACCAATGCC TAAAGCTGTT GGCCACAGAT CTTGATAAAT TCAATCAAGC TTTACGTAAA
TTGGCGCCCG CACTAACCGA GGGCGAACAC ATTGCTTACC TGAGTTTTAT CTACAACGTT
GGTACCGAGG CTTTTAGTAC CTCGACATTA AGAAAAAAGT TCTTAAATGG CGAGCGAGTC
GCGGCATGTG ATGAATTACT TAGGTGGGTA TACGCCAAAG GCAGACGGTT ACCCGGACTA
GTCAAACGCC GCTCAAATGA GCGGCGTTTT TGTATGAGGG ATTTGCAAAA TGTTCAATAG
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| Protein sequence | MSIKSQLAAL GLTGSLLSGA VLIAVHEGEI HHTYLDPVGV STACFGHTGK DIKVGMVFSR
DQCLKLLATD LDKFNQALRK LAPALTEGEH IAYLSFIYNV GTEAFSTSTL RKKFLNGERV
AACDELLRWV YAKGRRLPGL VKRRSNERRF CMRDLQNVQ
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