| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3213 |
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| Symbol | |
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| ID | 4019742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3847826 |
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| End bp | 3848887 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957266 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_564212 |
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| Protein GI | 91794561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.106203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAAA AGAAACCCCT AAGCCAAGGC CAACTGCGGC GCATGCGTGA TAATCAAAGC
AAGCGACTTA AGCGCAGCCA CACTCAAGAT ACCACCAATG AGTTGCAAGA CAATTTATTG
GGGCCCGAGC AAGCTGGCGT GGTTATTTCA CGCTTTGGAC AACATGCCGA TATTGAGACT
CAAGATGGTG CAACTGCGCG CTGCAACATT CGCCGCGCCG TCACCAGTTT AGTCACAGGT
GACAAGGTTA TCGTACGCCT TGCCACCGAG CAGCATTCAA GCTCAGGCAT TGGCGGCATT
GTTATCGCCG TGCATCCGCG AACCTCTTCG CTGACTCGTC CAGATCTTTA CGATGGCGTT
AAAATTATCG CGTCAAACAT AGACCAGATT TTAATTGTCT CGTCCGTGTT GCCAAGCTTT
ACCACTCAAA TAATCGACCG CTACTTGGTT GCCTGTGAAG ATACCGATAT TCCCGCGGTG
ATCATCTTAA ATAAAACCGA CTTGCTTACC GATGAAAACC GCCCTGAAAT CGAAGCCGCG
TTAGCTAGGT ACAGAGCCAT TGGCTATCCG GTGTATTTAA TCAGTAGCCA TACAGGCGAA
GGCGTCGATG ACATAAAAGA TTTACTCAAA GATAAAGTCA GCGTATTCGC AGGGCAATCT
GGTGTGGGAA AATCATCGCT TATCAATGCC CTCATGCCAG ATGCCGAGCT AATAGTGGGT
GATGTATCGG GAAATTCAGG TCTAGGTCAA CATACTACGA CTACCGCCAA ATTATTGCAT
TTCCAAAGTG GCGGCGATTT GATTGATTCC CCAGGTGTGC GAGAATTTGC CCTGTGGCAT
TTACCTGCGC CCCGGGTTGG CTGGTGTTTT GTGGAGTTTC GCGATTTTAT AGGTACCTGT
AAGTTCCGTG ATTGTAAACA CGGTGATGAC CCAGGTTGCG CCCTGCAAGA AGCCCTCGCC
GCGGGTAAAA TCACCCAAGA CAGATTCGAT AATTACCATA AAATCATTGC CAGTCTAGAC
GAGCAAAGGC ATGCGAGACA TTTTCGCAAT GCCGACGAAT AA
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| Protein sequence | MSKKKPLSQG QLRRMRDNQS KRLKRSHTQD TTNELQDNLL GPEQAGVVIS RFGQHADIET
QDGATARCNI RRAVTSLVTG DKVIVRLATE QHSSSGIGGI VIAVHPRTSS LTRPDLYDGV
KIIASNIDQI LIVSSVLPSF TTQIIDRYLV ACEDTDIPAV IILNKTDLLT DENRPEIEAA
LARYRAIGYP VYLISSHTGE GVDDIKDLLK DKVSVFAGQS GVGKSSLINA LMPDAELIVG
DVSGNSGLGQ HTTTTAKLLH FQSGGDLIDS PGVREFALWH LPAPRVGWCF VEFRDFIGTC
KFRDCKHGDD PGCALQEALA AGKITQDRFD NYHKIIASLD EQRHARHFRN ADE
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