Gene Sden_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3197 
Symbol 
ID4019723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3831637 
End bp3832095 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content44% 
IMG OID637957247 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_564196 
Protein GI91794545 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTA TTACTGCTAA TCGTCCATAT TTGTTGCGTG CTTATTATGA GTGGTTGATG 
GACAACCACT TAACGCCGCA TGTGGTTGTG GATGCCTTTG TAAAAGGGAC TCAAGTACCT
CAGCAATTTG TGAAGGACGG TCAAATCGTT CTGAACATAG CCGAAGGTGC CGTGGCTAAT
TTACACATAG GTAATGATTT TGTTGAATTT AATGCTCGCT TTGGCGGGGT GCCACAACAA
GTGGTTGTCC CATTAGCGGC CATAGTGGCT ATCTACGCCC GTGAAAATGG CGCTGGCACA
GTGTTCGACA TGGAGGATGC TTACATGATT GAAAGTGACT TAGATCAACT TTCTTCAGTG
GCACCAGCCT TGTCCGGTGT AAAAGATACC AAATCAGATG AAGCAAAAAA GACTTCTGAA
ACAACCAAGC GTCCAAGCCA TTTGACTTTA GTTAAATAA
 
Protein sequence
MTAITANRPY LLRAYYEWLM DNHLTPHVVV DAFVKGTQVP QQFVKDGQIV LNIAEGAVAN 
LHIGNDFVEF NARFGGVPQQ VVVPLAAIVA IYARENGAGT VFDMEDAYMI ESDLDQLSSV
APALSGVKDT KSDEAKKTSE TTKRPSHLTL VK