| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3181 |
|---|
| Symbol | |
|---|
| ID | 4019707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3813319 |
|---|
| End bp | 3813798 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637957231 |
|---|
| Product | regulatory protein, MarR |
|---|
| Protein accession | YP_564180 |
|---|
| Protein GI | 91794529 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATC CTAAATATAA AGTCTTGATT GAAGAAGCGA ATGCCAGAGG CAAAGATCAC
GTTTCGATGC AGTTATGTGG CGAGTTACTG TCGCTCAACC AGGTAATTGT TGAGCAATGT
AGCGAGCGTG TGGGACAACA TGCCTTATCG GAAGGCCGTT TTGTGGTCAT GTTACTGCTT
TACAACATGG GAGAGCTTAC CCCCTCTGAA CTTTCCAGCA TGACAGGCTT AACCCGTTCG
GCAATGACTT CCGTTATGGA TTTTTTGGAA AAACATCAAT ATGCGGTACG CAATATGGGC
TCTGCTGATC GACGCTCATT TACCGTGAGT ATGATCGACA ACGGCAAGGT ATTTTTCGAG
CAAGTACTTG AATCACAATT AGATTGGCTA GCCTGCTTGA GCGACAGTTT AGATGCCGAT
GAGAAACAGC AGTTTTTACA TCTGACCCGT AAAATAGCGT TAGGCCTGAA ACAAGATTAA
|
|---|
| Protein sequence | MLNPKYKVLI EEANARGKDH VSMQLCGELL SLNQVIVEQC SERVGQHALS EGRFVVMLLL
YNMGELTPSE LSSMTGLTRS AMTSVMDFLE KHQYAVRNMG SADRRSFTVS MIDNGKVFFE
QVLESQLDWL ACLSDSLDAD EKQQFLHLTR KIALGLKQD
|
|---|
| |