| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3165 |
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| Symbol | |
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| ID | 4019691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3795429 |
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| End bp | 3797981 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957215 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_564164 |
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| Protein GI | 91794513 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGTCAT TACCCATAGC AGACTTATTT GCAGCACTTA GGCAAAAGCT CACAAGCCAT
AAGCAAATCA TCATAGAAGC GCCCACTGGG GCAGGTAAAT CCACGGCTCT GCCCTTGGAG
ATGCTCGGCT GGCCTGAGAT TACTGGCCGC ATTCTCATGT TGGAACCCAG ACGAGTAGCC
ACCCGCAGCG TGGCCCAGTT TATCGCCAAA CAGCTTAATC AGGCTGTGGG GGAAACGGTC
GGTTATCGGG TGCGAGGTGA GAGCAAGGTC AGCCGTCATA CCCGCCTTGA AATCGTCACC
GAAGGCATTC TGACGCGGAT GATCCAAGAC GATCCCGAGC TCACGGGTAT AGATATCATT
ATTTTCGATG AAATTCATGA GCGCCACTTA ACCACAGACT TAGGCCTAGC CTTAGCCTTA
GAAGTGCAGC AATCCTTACG GGATGATTTG CGCTTAATTG CCATGTCGGC GACCTTAACC
GGCCTGCCTT TAGAAGGCTT AATGCCTGAG GCGGCCAAGC TTATAAGCCT GGGGCGCAGT
TTTAAGGTTG ATATCGAATA TCGCCCTGTC CCCAGTCAGC AGCAGTGGCT CGATTATATG
GGACGGGTCA TAGTTGAATT ACTCACAAAC CCCATTGACC ATAAGCAAGC AAACTCTGAG
GTATTCCAAG GCGGCTTGCT GGCATTTTTG CCGGGGAAAG GTGAAATTCA GCGTCTTGCC
AGCGTGTTGT CTCAACGGCT TGACCCGCTA ATGTTCCAAG TTTGTCCTCT CTATGGTGAG
TTATCACCCG CCGAGCAAGA TAAGGCGATT TCACCTGCAA AGGCTGGAGT TAGAAAAGTG
GTGCTAGCCA CCAATGTGGC CGAATCCAGT TTAACCATCA GCGATATCAC CTTAGTCGTG
GACAGCGGTT ATAAACGCGG CGCCAGTTTT AATCCCAGAA CCGGCGTGAC TCGACTCGGG
CTCAAGCGCA TTAGCCAAGC GTCTGCGGTG CAGCGAAGTG GCCGCGCCGG CCGCGTTGCC
CAAGGGTTTG GCATCAGGCT TTGGAGTCAG GAAGAGCAAG GGCGGTTATT AGCTGCCGAT
GAGGCTGAGA TTGCCACCGC AGAGTTGGTT TCTATGGCAC TGGAATGCGC CGCTTGGGGC
GTGAGTGACT GTGAAAAACT CCCCCTGTTA AGTGCGCCGC CAGCTGTGCA TGAGCAGTTA
AGTTGGCAGT TGTTGCAGCG TCTTGAGCTG GTGGATGAAG GAAAAAAAAT TACTGCCTTA
GGTCAAGCGG CCCATGCCTT AGGCTGTCAT CCAAGGCTTG GGCATATGTT ACTCAAGGCC
AAAGCCATAT CAGCGACACA ATCAATTGAC AGTGCGAGTG ATTTTTCAAA TTTAGCCTGC
CTGCTGGCGG CCATTATTGA GGCCCGCGGC TTGCCTAGAA AAGGCGCCGA TATCAGTGGT
TACTTAGCGT TGGCAACCCA AGGCAGTATG GGGCAACAGG CACGAAACTG GCAGCGAAAA
CTGGCGCTGA GTGGCAGCCT AGAACGGGCG GCAAGTCAGG CTAATAACAG TGATATCAGT
CTATTACTCG CACTGGCCTT TCCCGATAGA ATCGCTAAAG CCAGAGGCAA AGAAGGATTT
TTATTGAGTA ATGGTACCGG GGTCACTTTA GATGCCGCGG ATCCTTTGTC GTTGAGCCCA
TGGTTAGTCG TCGCCGATTT TCAAGAGAAT GAAGGTCGCA GCGCTGGGCG AGTGTACCTT
GCTGCCGAAC TTGACATGAG CTTATTCGAC GATGAATTAG CCTACTTAGT CTCTAAAGAA
TCTCACTGTG GTTGGGATGA AATCAAGGGG CGTTTCTTTG GCGAAAACCG TTATAGGCTC
GGGCACATAA TAGTAAAAAC CCAAACGGGA CAAGTGCTTG ATGCTGAGGG GCGCACGGCG
GCGTTGATTG CGTTATTGCG CGAAAAAGGA TTAAGCCTAG TTAATTTTGA TGAGGCTGTT
ATCCAGCTGC AAAACCGCGT ACAGTTAGCC AGAATTTTTG CCCCTGAATA TGACTGGCCC
AGCATGGATG AAGCGGCTTT GTTAGCCGAG CTGGAACATT GGCTGGGTCC TTACTTGAGT
GAGGTAAATA ACTTAACTAA ATTGAGCAAG CTTAATCTAT TGCCTTTGTT GTCATCGCGC
CTTAGTTGGG AGCTGAATCA AAAATTGGAG ATACTTGCCC CCACTCATTG GCCTATGGCA
ACGGGGACCC GTGCCCCCAT TAGTTATCAT TATCAGCAAG ATGGTACCCA GAACCAGGCT
CAAGCTAGGT TAAGTGTGCG TTTACAAGAA GCCTATGGCC TGAGTCAGAG CCCAGTGTTA
TTTAATGGCA AGTTAACCGT CACCATGGCC TTGTTATCAC CGGCGCAGCG ACCTTTGGCA
CTCACCTCAG ATTTAGCCAG TTTTTGGAAT GGCCCTTATG TGGACGTGAA GAAAGAAATG
CGCGGCCGTT ACCCTAAACA CTTGTGGCCG GATGACCCAA TAAATACTGT GCCAACTAAA
TTTACCAAGA AGAAAACCCC AGGTTTGAAT TAA
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| Protein sequence | MSSLPIADLF AALRQKLTSH KQIIIEAPTG AGKSTALPLE MLGWPEITGR ILMLEPRRVA
TRSVAQFIAK QLNQAVGETV GYRVRGESKV SRHTRLEIVT EGILTRMIQD DPELTGIDII
IFDEIHERHL TTDLGLALAL EVQQSLRDDL RLIAMSATLT GLPLEGLMPE AAKLISLGRS
FKVDIEYRPV PSQQQWLDYM GRVIVELLTN PIDHKQANSE VFQGGLLAFL PGKGEIQRLA
SVLSQRLDPL MFQVCPLYGE LSPAEQDKAI SPAKAGVRKV VLATNVAESS LTISDITLVV
DSGYKRGASF NPRTGVTRLG LKRISQASAV QRSGRAGRVA QGFGIRLWSQ EEQGRLLAAD
EAEIATAELV SMALECAAWG VSDCEKLPLL SAPPAVHEQL SWQLLQRLEL VDEGKKITAL
GQAAHALGCH PRLGHMLLKA KAISATQSID SASDFSNLAC LLAAIIEARG LPRKGADISG
YLALATQGSM GQQARNWQRK LALSGSLERA ASQANNSDIS LLLALAFPDR IAKARGKEGF
LLSNGTGVTL DAADPLSLSP WLVVADFQEN EGRSAGRVYL AAELDMSLFD DELAYLVSKE
SHCGWDEIKG RFFGENRYRL GHIIVKTQTG QVLDAEGRTA ALIALLREKG LSLVNFDEAV
IQLQNRVQLA RIFAPEYDWP SMDEAALLAE LEHWLGPYLS EVNNLTKLSK LNLLPLLSSR
LSWELNQKLE ILAPTHWPMA TGTRAPISYH YQQDGTQNQA QARLSVRLQE AYGLSQSPVL
FNGKLTVTMA LLSPAQRPLA LTSDLASFWN GPYVDVKKEM RGRYPKHLWP DDPINTVPTK
FTKKKTPGLN
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