Gene Sden_3163 details

Gene Information

• Locus tag: Sden_3163
• ID: 4019689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 3792247
• End bp: 3793005
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637957213
• Product: hypothetical protein
• Protein accession: YP_564162
• Protein GI: 91794511

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0238375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTGG CATCCTGGTA TATGGCTGCG TCAATTACAG AAGAATCCAA TAATATGTTT 
TTATCTCCTT ATTTTTCAAA TAATAACAAT AAAGTTGTTA TTTCTTCCCA GCAGGCAAGT 
GACTTTGCTA AGCAGGTCGC TCAAGATTTT AATCCTATTC ATGATGTGGG CGCTAAGCGT 
TTCTGCGTTC CAGGGGATCT GTTATTTGCA TTGATCTTGA CCCAGTGCGG GTTAAGCAAA 
AATATGACCT TTAAATTTGC TGGCATGGTT GGGGATGGGG TCGAGTTAGC GTTAGACCCT 
AACGCCGGAG ATGAGTTTAG CCTGAGTGAC ACCCGTGGTA AAACTTATTT AAATGTAAGT 
CGTAGTGGCG ACATGAGTCG CTGTGAGGTG CAAACAGAAG CCTTTATTCG CAGCTATGTG 
GCGTTTTCTG GACTTAACTT CATCCATGTA TTAATTCCTT TGATGAAGGC CCGCAAGGTG 
ATGATTAACC CTGACCGTCC CTTGGTGATA TACGAGAGCA TGTCGTTCCA TTTGGACACC 
TTAGATTTCA GTGAAATGAG CCTACATTTG GCCTCACAAG AGCTGGCAAT TGATGGTAAA 
CGTGGTGATG TAACCTTAAC CTTTGAGCTA TTAAGTGAAG GCAAGATAAT AGGTACAGGT 
AAAAAGACCT TAGTGCTCAG CGGTCTACGT GAGTATGAAG AAGAGGCCGC TCAAGGCATG 
TGCAACACTT ATGAGTCGCG CAAGTTGATG TTTTCTTAA 

 

Protein sequence

MSLASWYMAA SITEESNNMF LSPYFSNNNN KVVISSQQAS DFAKQVAQDF NPIHDVGAKR 
FCVPGDLLFA LILTQCGLSK NMTFKFAGMV GDGVELALDP NAGDEFSLSD TRGKTYLNVS 
RSGDMSRCEV QTEAFIRSYV AFSGLNFIHV LIPLMKARKV MINPDRPLVI YESMSFHLDT 
LDFSEMSLHL ASQELAIDGK RGDVTLTFEL LSEGKIIGTG KKTLVLSGLR EYEEEAAQGM 
CNTYESRKLM FS