Gene Sden_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3161 
Symbol 
ID4019687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3791228 
End bp3791704 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID637957211 
Productregulatory protein, MarR 
Protein accessionYP_564160 
Protein GI91794509 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0336123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCC CATTCGCTGT CAACCCCGAA TCAACAGTCC ATAGACAGGA TCCCATGCCT 
GCTAGTCTCG ATGCTCAAGT GTGTTTCTCA TTATACAGTG CTGCCAATGC CATGGTGCGC
GCCTATCGAC CTTTTCTGGA GGAGTTGTCG CTGACTTATC CGCAATACTT AGCCATGCTA
GTGCTGTGGC AGCAAGATGG GATCAGTGTG AAAACCTTAG GGGAAGCGCT ACATCTGGAC
TCGGGGACCT TAACACCTTT GCTTAAAAGG TTGGAAAATA AGGGCTTGGT GACTCGTGGG
CGTTCACAAG GTGATGAGCG AGTGCGGGTG CTCTGCCTCA CCAAACAAGG TGTCGCCCTT
AAAGTTGCCG CAGGGTTAAT TCCTGAAAAA ATGCGTTGTA AACTGGGCGA CGACGCTGGT
CAGTTGCAAG CGCTTAAACG GCTGTGTGAC AAGGCGCTAA TGCTACTAAC AGATTAA
 
Protein sequence
MKPPFAVNPE STVHRQDPMP ASLDAQVCFS LYSAANAMVR AYRPFLEELS LTYPQYLAML 
VLWQQDGISV KTLGEALHLD SGTLTPLLKR LENKGLVTRG RSQGDERVRV LCLTKQGVAL
KVAAGLIPEK MRCKLGDDAG QLQALKRLCD KALMLLTD