Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3161 |
Symbol | |
ID | 4019687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3791228 |
End bp | 3791704 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637957211 |
Product | regulatory protein, MarR |
Protein accession | YP_564160 |
Protein GI | 91794509 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0336123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCCC CATTCGCTGT CAACCCCGAA TCAACAGTCC ATAGACAGGA TCCCATGCCT GCTAGTCTCG ATGCTCAAGT GTGTTTCTCA TTATACAGTG CTGCCAATGC CATGGTGCGC GCCTATCGAC CTTTTCTGGA GGAGTTGTCG CTGACTTATC CGCAATACTT AGCCATGCTA GTGCTGTGGC AGCAAGATGG GATCAGTGTG AAAACCTTAG GGGAAGCGCT ACATCTGGAC TCGGGGACCT TAACACCTTT GCTTAAAAGG TTGGAAAATA AGGGCTTGGT GACTCGTGGG CGTTCACAAG GTGATGAGCG AGTGCGGGTG CTCTGCCTCA CCAAACAAGG TGTCGCCCTT AAAGTTGCCG CAGGGTTAAT TCCTGAAAAA ATGCGTTGTA AACTGGGCGA CGACGCTGGT CAGTTGCAAG CGCTTAAACG GCTGTGTGAC AAGGCGCTAA TGCTACTAAC AGATTAA
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Protein sequence | MKPPFAVNPE STVHRQDPMP ASLDAQVCFS LYSAANAMVR AYRPFLEELS LTYPQYLAML VLWQQDGISV KTLGEALHLD SGTLTPLLKR LENKGLVTRG RSQGDERVRV LCLTKQGVAL KVAAGLIPEK MRCKLGDDAG QLQALKRLCD KALMLLTD
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