| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3159 |
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| Symbol | |
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| ID | 4019685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3788978 |
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| End bp | 3789862 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957209 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_564158 |
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| Protein GI | 91794507 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTAC AGGGTATGCG CGCCTTAGTG CTAACGGCCG AGCTTGGCTC AGTATCGGCT
GCTGCAAGGC GTATGGGTAA GCGCCAGTCT CAGGTGAGCC AGTGGCTGAG CAATCTTGAA
TTAGATCTTG GCTTGACCTT GTTTGAGCGT ACTCAGAATC AGATTGTACT CAATGCCGCA
GGGGAGGCGT TATTGCCAAG TGCCATCATG GCACTATCGC AATGGGACAG TTTTCAAGGT
GCCGCCGAGG TGTTAGCCCT GCAGGGTAAA AATACCTTAG TGCTAGGTGT AGAAAACTAT
ATTCCCATCA GCAGCCTTAA TCAGGCTGTT GTACTATTTT GCCAAGCCTT CCCTAAGGTC
AATGTGGAGA TTATCAGCGA CAGCCGTGAT GCCTTGCTGG AGAGCTTTAA AACCAAAGAG
ATTGACCTAG TACTCGTCAA TGAGGACTTG AGTCTGGCTC AGCTACAATG GGGATATTGC
CGAGTAGGAC GTTATCAAGA TGTGTTCGTA GTAAGCCCTG ACCACCCATT GGCTGGTCAA
GTTTGTGATG GCCGCGAGCT GGCGCAATAC CGTGAATTAA TTTGGGGCAG GGGGGAGATG
AAAGCGGATA TCCTCGATGT GGGCTTTAGC AGCCATTATT GCATCAGCCC TGATTTACCC
CAGTTGCTAA CATTGCTGGG CCAATTACCT GCTTACAGCG TGCTACCTAA GGTGTTAGTG
CAGTACAAGT TGGACTCAGG CGAGTTAGTT ATACTAAACC TCGCCAATGA ACTCGCTCCC
ATGGCGCGCT TTACCCAGCT GTTTTGGCAT CATGGTTTCG AGCTTAGCCC CCTAGGCAAG
CCTTTGCTGG CTGAACTGAA AGTCGCCTTA AACCAAATGA TTTGA
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| Protein sequence | MNLQGMRALV LTAELGSVSA AARRMGKRQS QVSQWLSNLE LDLGLTLFER TQNQIVLNAA
GEALLPSAIM ALSQWDSFQG AAEVLALQGK NTLVLGVENY IPISSLNQAV VLFCQAFPKV
NVEIISDSRD ALLESFKTKE IDLVLVNEDL SLAQLQWGYC RVGRYQDVFV VSPDHPLAGQ
VCDGRELAQY RELIWGRGEM KADILDVGFS SHYCISPDLP QLLTLLGQLP AYSVLPKVLV
QYKLDSGELV ILNLANELAP MARFTQLFWH HGFELSPLGK PLLAELKVAL NQMI
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