| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3082 |
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| Symbol | |
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| ID | 4019608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3703659 |
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| End bp | 3704510 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637957134 |
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| Product | hypothetical protein |
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| Protein accession | YP_564083 |
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| Protein GI | 91794432 |
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| COG category | [K] Transcription |
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| COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC CAAGAGTATT TATAGGCTCA TCTGTCGAAA GCTTGCCTAT TGCAGATGCA
ATTGCTGAGA ACTTAGAGTT TGATGCGGAA GTTACAATAT GGCGGAACGG AACATTTAAT
CTATCGAGTA ACGCTCTTGA TGATTTAATT TCAAAAGCTA AATCCGTGGA TTTCTCAATT
TTTATTTTCT CTCCAGACGA CCTGACAATT ATGAAGTCTA GAGAAAAGTA CGCTGTAAGA
GACAATGTGG TTTTTGAACT TGGTTTGTTT ATTGGTGCAA TTGGAAAGAA CAGGTGCTTT
ATTGTTAAGC CACGTGACGT TGACCTGCAT TTCCCAAGTG ATCTTCTAGG GATTACTCCA
ACTGACTTTG ATGCAAACAG AAGTGATGAG GACTTAGCGT CATCTCTTAA TTACTCCGCT
ACACAAATCA AGCGAGCTTT CAAAGCGCAA GGCTTGCTTG AACTTGATTC TGTGCAGGAA
AAGCCACGCA TTGATGTCAA TGCTCAATTA GCAACGCTCA CCGACACTGA TATGATCGCA
TTGTCTGTGT TGCTTGAGTC TGTTAACTCT GATGTAGATG GCTGCGCTAG TTGGGACTTG
TATAACCGTT TTAATAATTA TGATTTTAGT TCAGCACAGG TCAACTTGGC AGTAATAAAG
CTCACTCGTT CAGGTATGAT CGAAAAGTTA AATACTTCGG ACTTTAATGG CAATGAGTAT
TTTAGCTACA AGTTAACTGA GTACGGAATT GACGTTTGCT TATCAAATCA AAATCGTATT
GAAACTCTTA TTGCACCAAA GAAACGACAA TCTGGCAGGG ACGTTCCTCA ACAACCTCCA
GTACGCAGCT AA
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| Protein sequence | MRKPRVFIGS SVESLPIADA IAENLEFDAE VTIWRNGTFN LSSNALDDLI SKAKSVDFSI
FIFSPDDLTI MKSREKYAVR DNVVFELGLF IGAIGKNRCF IVKPRDVDLH FPSDLLGITP
TDFDANRSDE DLASSLNYSA TQIKRAFKAQ GLLELDSVQE KPRIDVNAQL ATLTDTDMIA
LSVLLESVNS DVDGCASWDL YNRFNNYDFS SAQVNLAVIK LTRSGMIEKL NTSDFNGNEY
FSYKLTEYGI DVCLSNQNRI ETLIAPKKRQ SGRDVPQQPP VRS
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