| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3037 |
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| Symbol | |
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| ID | 4019562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3647983 |
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| End bp | 3648945 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637957088 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_564038 |
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| Protein GI | 91794387 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCAC CGAAAATCCC CGCGAACGAA GCTGAGAGAC TGCATGCATT AAGGACATTA
CAAATCCTCG ATACCTCAGA TGAAGAAAGG TTTGATAGGG TCACCCGCAT GGCAAAACGC
ATGTTTGGGG TGCAGATTTC ATTGGTAAGC TTGGTTGATG AAAATCGCCA ATGGTTTAAA
TCCAAACAAG GACTCGATGC CGAAGAAACC TCAAGAGAAA TCTCCTTTTG TGGCCATGCC
ATTAATCAAG ATGGCTTGTT TATCATTCCC GATACCAATG AGGATGCGCG CTTCGCCGAT
AATCCTTTGG TGACAGATGC ACCCAATATT CGTTTCTATG CGGGATACCC CCTTAAACTA
CGTCACGGGA TTAATCTAGG CACTTTGTGC CTCATCGATT CTAAACCCAA GATATTAGAT
AGCGAAGATC GGCAGTTATT AAACGATCTG GGGGCTATGA TAGAGCAAGA AATTAAGTCC
GTTCAATTAG CCACCTTAGA TGAACTGACC ATGATCTCCA ATAGACGTGG TTTTTTATCC
CTTGCAGATT ACAGCCTTAA AGTTTGTCGC CGCAAACAGA TGTCAGTGTC ATTAATCTTG
TTTGATCTGA ATAAATTTAA GCTTATTAAT GATGAACATG GTCACCATGA AGGTGATTTC
GCTTTAACGA CCTTTGCCCA GGCTTTGCAA GAGTGTTTTC GAGAGTGCGA TGTGATTGGC
AGGCTCGGGG GGGATGAGTT TGTTGTCATG CTTACCGATA CCAGCAAAGA CAAGATAGAT
GATATTCTGA TCCGATTTAG CGAGATATTA GACAGGACAA ATATTGAAAT TAACAAACCC
TATAAGATTG AATTCAGCGC AGGAGTAGCA AGCTTCCCCC ATGATACAGA TAAGTCATTA
GAACAAATGA TTGAGCAAGC CGATGCGGCC ATGTATAAAG ACAAAAATGG TGAAAATCGC
TAA
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| Protein sequence | MIPPKIPANE AERLHALRTL QILDTSDEER FDRVTRMAKR MFGVQISLVS LVDENRQWFK
SKQGLDAEET SREISFCGHA INQDGLFIIP DTNEDARFAD NPLVTDAPNI RFYAGYPLKL
RHGINLGTLC LIDSKPKILD SEDRQLLNDL GAMIEQEIKS VQLATLDELT MISNRRGFLS
LADYSLKVCR RKQMSVSLIL FDLNKFKLIN DEHGHHEGDF ALTTFAQALQ ECFRECDVIG
RLGGDEFVVM LTDTSKDKID DILIRFSEIL DRTNIEINKP YKIEFSAGVA SFPHDTDKSL
EQMIEQADAA MYKDKNGENR
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