Gene Sden_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3023 
Symbol 
ID4019548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3631466 
End bp3631807 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content47% 
IMG OID637957074 
Productcupin 2, barrel 
Protein accessionYP_564024 
Protein GI91794373 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAG TATCAACCCA AAACGCCGAG CATTATCTCT GGGGCGACCA TTGTGATGGA 
TGGCATTTAG CTAAAAGTCC GAATTTAAGT GTCATTCAAG AATCCGTGCC CAGTGGCTGC
GCCGAAATAC GTCACTATCA TGCCCACAGT GAGCAGTTCT TCTATGTGTT ATCAGGAGTG
GCCACACTAG AACTTGATGG CACAATTCAT CAGTTAGCAG CAAATCAAGG GTTGCACGTC
CCTGTTTTGA TGGCGCATCA ATTAAGCAAC GTGAACGAGG AAACGCTGGT ATTTATCGTG
GTCTCAACGC CGCCAAGTCA TGGGGATAGG ATCAATGCCT AG
 
Protein sequence
MSVVSTQNAE HYLWGDHCDG WHLAKSPNLS VIQESVPSGC AEIRHYHAHS EQFFYVLSGV 
ATLELDGTIH QLAANQGLHV PVLMAHQLSN VNEETLVFIV VSTPPSHGDR INA