| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2980 |
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| Symbol | |
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| ID | 4019505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3566790 |
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| End bp | 3567971 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957031 |
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| Product | peptidase M50 |
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| Protein accession | YP_563981 |
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| Protein GI | 91794330 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0270746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCT TAAACATTGA ATGCCTTGGA AAACGCTTAC GCCTTGAGGC TTCTATGGCC
GGTTGGCAAC AGCTATTTTG GGACAATCAA TTGGTGTCTC AGCTCCCTGC AAGCCCAGAT
AGGCAAGCCT TTAATATTCA TTTGTTTGAG CTTAGCCAAA CACCCGAGTC TCCAACAAAT
CACCCCTCAG AAAATCAGGC CGGATCATCT GCCCCAATTG CGGATATCCC AGATGATGCA
GATATTTCAA TAGCGCCGCA TGTTAAGCCT ATTACTGTGC GCTTAGAAAT CGATGTTATA
TGGCAGCCGT TTAACTTGAG TTACTGCTTA TTAGTGGATG ATGAGCAAAT CACTCAAGGA
CAGAGAAGCA CTAAGGATAT CGAAGCCCAG CAAGCTGAAA TAGCACCAGT TAAAAAAGTA
AACTTCAGTG TAGTCGGCTT AGCCTCCCTC GGGTTTAAGC TGTTAAAAAG TGCTAAAGTC
ATCAAGGTTT TGTTAGCTAG TGCCAGTGTT GCCGCTTATT CCTGGCTATT TTCTATAGAA
TTTGCCCTCG CCCTTATAGG TTGTTTAGTT TTTCATGAAT ACGGTCACAT CAGGGCAATG
AAGTATTTTG GTATGAAAAC CAAGGGAATA TACCTCATCC CCTTTGTCGG TGGTCTGGCG
TTAACCGATG AGCGCATCAA TACTCGTTGG CAAGATGTGG TCATATCCAT CATGGGACCC
AGCTTTGGTC TCTTGCTTTC TATTGGCTCC TTGGTGCTTT ATTGGGTAAC GGGTAATGTG
TTCTTCGCAG GGCTTGCAAG CTTTAACGCA TTACTCAACC TGTTTAATTT ATTGCCTATT
TTACCTTTAG ATGGTGGCCA TATTTTAAAA AGCATCAGCT TTTCCATGAA CAGCATCACA
GGCTTAGTCG CTTGTATTCT AGGGGCGGCA GTCGGGGTTT ACATCAGTTA CAGCTTAGGC
TTAGCCCTAT TGGGCTTTCT ATTGTTAATT GGTAGTCTTG AGATAGTGTT TGAATGGCGC
AGCCGTCATC AAAGCCATTT GTTACCTTTG GACAGATATG GGCAAGTATT TTCTACCATC
TGGTATTTTC TAACTGTAGG CCTGCTTATT GGGATTATTT GGTATCTCGC CCACAGCAGT
GACAGCATAT TGGCTCTGCC ACTAGACATT TTAAAGAGTT AA
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| Protein sequence | MELLNIECLG KRLRLEASMA GWQQLFWDNQ LVSQLPASPD RQAFNIHLFE LSQTPESPTN
HPSENQAGSS APIADIPDDA DISIAPHVKP ITVRLEIDVI WQPFNLSYCL LVDDEQITQG
QRSTKDIEAQ QAEIAPVKKV NFSVVGLASL GFKLLKSAKV IKVLLASASV AAYSWLFSIE
FALALIGCLV FHEYGHIRAM KYFGMKTKGI YLIPFVGGLA LTDERINTRW QDVVISIMGP
SFGLLLSIGS LVLYWVTGNV FFAGLASFNA LLNLFNLLPI LPLDGGHILK SISFSMNSIT
GLVACILGAA VGVYISYSLG LALLGFLLLI GSLEIVFEWR SRHQSHLLPL DRYGQVFSTI
WYFLTVGLLI GIIWYLAHSS DSILALPLDI LKS
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