| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2963 |
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| Symbol | |
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| ID | 4019488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3549729 |
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| End bp | 3550640 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957014 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_563964 |
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| Protein GI | 91794313 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATT TGAACGGTAT GATGCTGTTT GCAGCGGTAG TAAGGGCTAA GGGTTTCTCT
CAAGCGGCTC GAGAGGTCGG ACAACCTAAG TCGACCATTA GTCGAAAAGT TGCTCAACTT
GAGGAGCAAT TAGGGGTCCG ATTACTGCAA AGAGACACTC GAAATATCAG CCTAACGCAA
GTAGGTGCAC TATTTTTTCA ACATTGTGAT TCAATCAGCC AAGAAATAGA AGCTGCAAAA
GCCATTATAG AAAACACTCA CAACGATATT TCAGGCGCAC TCAGAGTCGC CATTCCAGTG
TCATTTTCCC AAGATGTTAT TGCCAGTCTG TGCAGCAACT TTATGCGACT TTATCCCAAT
ATCGAGCTTG ATATTCAGTT TACCGATAAT GATGTCGGTT TAGTGGGTGA AGGTTATGAT
ATCGCCATCA AGTACGGTCC ACTGCAATCA TCGGACTTAG TCGCTAAGTT ATTATTCGAG
CGCCAACCCA TTCTTGTGGC CAGCCCAAGT TACATTAAAA ATCACGGTAC TCCCGCGACA
CCCCAAGAGC TTGCACAACA CAATGGCATT CTTTTAGGCA CCACACTTTC AGCCCCCATT
TGGCCACTGG GCAAAGGGGG GCGAAAAACC ATGGCTACAT TTAACCGCAA AGTCAGGGTG
AATAGTGCCA GCATGGTAAA ACGCTTAGCG ATTGATGCCT ATGGTATAGC CATGCTATCT
AATACCAGTT GCAAGCAGGA ACTCGCTTCA GGCGCCCTAG TGCCCATATT GCAGGAATGG
CCGATGGAGC CGTTCAAAGT GTATGGGGTA TATTCCAGTA GAAGGCAACT CGCTACTAAC
ATCAGTGCAT TTTTAGAGTT TTTCGCTAAA CGCTACGGTA GCCAAGAGTC ATTACAATCT
ATGATGAGCT AA
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| Protein sequence | MPDLNGMMLF AAVVRAKGFS QAAREVGQPK STISRKVAQL EEQLGVRLLQ RDTRNISLTQ
VGALFFQHCD SISQEIEAAK AIIENTHNDI SGALRVAIPV SFSQDVIASL CSNFMRLYPN
IELDIQFTDN DVGLVGEGYD IAIKYGPLQS SDLVAKLLFE RQPILVASPS YIKNHGTPAT
PQELAQHNGI LLGTTLSAPI WPLGKGGRKT MATFNRKVRV NSASMVKRLA IDAYGIAMLS
NTSCKQELAS GALVPILQEW PMEPFKVYGV YSSRRQLATN ISAFLEFFAK RYGSQESLQS
MMS
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