| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2912 |
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| Symbol | |
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| ID | 4019437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3475876 |
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| End bp | 3476382 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956963 |
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| Product | peptide deformylase |
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| Protein accession | YP_563913 |
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| Protein GI | 91794262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000305712 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTCGA GCCAGATACT GCCCATAGCG ATAACCGGTG AGCCTATTCT TAATCGAATC
GCGGTCAAAG TAAGTCAATT TGACGCCAGC TTAATCCAAT TGGCTGATGA TATGCTGGCG
ACCATGATGG CTGCAAACGG GGTTGGCATA GCGGCTGGAC AAGTTCACAG CCCACTTGCC
ATGTTCGTTA TGGCATCTCG CCCTAATGAG CGTTACCCCA ACGCGCCAGT TACTGAGCCT
AGGGTGATAA TCAATCCGCA GATATTGTCT TATTCCACAC AAACCCAAGC GGGCATTGAG
GGCTGTCTTT CTATTCCAGA TAGCAGAATG AGTATTGTCC GCTCGCAACA GATTGACACC
CGATTTCAAA ACCTTAAAGG TGAGTTTATC GAACAAAGCT TCAGTGATTT TGAGGCACGT
ATTTTTCAGC ATGAATTCGA CCATATCAAA GGCATAACCT TAATAGAGCG CCTTGCTCAG
CAGCAGAAAC AGGCGTACCC AGCATGA
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| Protein sequence | MSSSQILPIA ITGEPILNRI AVKVSQFDAS LIQLADDMLA TMMAANGVGI AAGQVHSPLA
MFVMASRPNE RYPNAPVTEP RVIINPQILS YSTQTQAGIE GCLSIPDSRM SIVRSQQIDT
RFQNLKGEFI EQSFSDFEAR IFQHEFDHIK GITLIERLAQ QQKQAYPA
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