| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2910 |
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| Symbol | |
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| ID | 4019435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3474552 |
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| End bp | 3475508 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956961 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_563911 |
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| Protein GI | 91794260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000305782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTG TGCTTATGCT GATTTTTTAC TCAAGCTTAC TGTTTGGCTG TCAAAAGGCG
GCCCAAGAAG TGTTGACCTT AACTCAAGAA GCCAGCTATA GCGCCAGTCT CTCCCATGAT
GCCAGTCTCG CCATTGTTAG TACTGCGCAC CAAGGCGTGC AAGTCTGGGA TCTCAAACAA
AAACGCATTA AATACACTTG GCATCAAGGT GAAGGAAAAA GCAATGTCAT TGCCACCGCC
TTGTCCGCCA ACGCGGCCTA TGCCGCCACC TTAACCAATC AATCTTTAGG CTTGTGGTCT
TTGGGTACTG GCGAGTCTGT GGGTTGGTGG TCCTTACCCG CATCGGGGCA AACCGTGGCG
GTGGCCAACA CAGGTCAAGC CTTAGTGGGT TTAGTGGATG GTTCGGTGTT GTCTCTTGCC
CATGACAGGC AAAGCCTAAT TAAATTCCTC GGTCACACAG AAAAAGTCAC CAGCGTGTCA
GTGTCTGCCG ATGGTCAATA TGCCCTTAGT GGGGGTAATG ATGCCCAAGT CATTCTTTGG
CATGCTCATA CAGGTCAACC TATCCAGCGC TGGCAATTAG CCTCAAGGGT CACTAAGGTA
TTACTCAATG ATGACGCCAG TATTAGTTTT GCCAGTGATA TCATGGGCAA TGCCTCCTTG
TGGCACAGCC AAAGCGGCAA GTTAAAGACC CGCCTTGATA TCAAGCGTCG TCAAATGACC
TTCTCGGCGG CACGTTTTAT CGACCAAGAC AAATACCTAC TCACAGGGAC ACCCTCCAAG
GAAATGTTCC TCTGGCACAG TCAAACCGGC AAAAAAATCG CCAGACGCCA AGTTCAAGTG
ACTAAGGATA ACCAAAACCG CGGCGCCGTT GTATACTCGG TGGCACGCCA GAGTCCAAGG
CGACTTGTGA GTATCAGCAG TCAAGGTCTG CTGGAGTCTT GGGACCTGCA ATATTAA
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| Protein sequence | MIRVLMLIFY SSLLFGCQKA AQEVLTLTQE ASYSASLSHD ASLAIVSTAH QGVQVWDLKQ
KRIKYTWHQG EGKSNVIATA LSANAAYAAT LTNQSLGLWS LGTGESVGWW SLPASGQTVA
VANTGQALVG LVDGSVLSLA HDRQSLIKFL GHTEKVTSVS VSADGQYALS GGNDAQVILW
HAHTGQPIQR WQLASRVTKV LLNDDASISF ASDIMGNASL WHSQSGKLKT RLDIKRRQMT
FSAARFIDQD KYLLTGTPSK EMFLWHSQTG KKIARRQVQV TKDNQNRGAV VYSVARQSPR
RLVSISSQGL LESWDLQY
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