| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2893 |
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| Symbol | |
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| ID | 4019418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3456420 |
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| End bp | 3457316 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956945 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_563895 |
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| Protein GI | 91794244 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAC TCACCGCCAT GCGCAGCTTC GTTGAAGTGG CCGATTGCGC CAGCTTCACC
CAAGCCGCAG AGCAGCTTAA TTTGAGCCGT TTACAGGTTT CTAGGCATGT TAAGGAACTG
GAGCAATGGC TAAACTTGCG GTTATTACAT CGCACTACCC GTAGCGTTAG CCTGACCTTA
GAAGGTGAGG AAACCTTGAG TTATTGCCAA GAGATCCTAA GTGGTGTGGC GCAGATGCAA
AGTCGGGCTC AGCAGCACAA TACCAAGCTT GTGGGCACCA TTCGTCTTGC CTCCCCTATC
GGCCTGGGTC AGCATAAATT GTTTGATGTG GTAAATGAAT TTATCGCCCT GCACCCCAAT
GTTAAATTTC AATTTGTGCT CGCAGACTCC CTAGCCGCCA TGGTGGGTGA GCGAGTGGAT
ATCGCGCTGA GGTATACTCA TCAGCCGGAC GACAACTTAA TCGCCCGGCG TTTGATGCAA
ATTGATAGTG TTATTTGTGC TGCACCTGAG TATCTGGAAC ATCATGAGCC CATCATAAAT
ATTGCCGATA TCGGCCGTCA CAACTGCCTA GTGCACACGA GTCAATCTCA GTGGCACTGG
CTCATAGACA ATCAGCATCA GCAGTTAAAT GTAGGCGGTA ATTTACAAGC TAATGACATG
GGGGTGCTAA TCAAGGCAGC GCTGCTGGCC AAGGGCCTCG TGTGTTTACC AGCAGATTTG
GCCAATCCCT ATTTAGCCGA CGGACAGCTT ATTGAGGTGT TACCTCAGTA TGTCTCTCCC
GGCAAACCAC TGTGGGCAGT GTACTTATCT CGCAGCTATC AGCTGTTGCA CGTACGTGCC
TTTATCGACT TTATTGCCCA GAAGTGGCAG CAGGATATCA CTAAGTGGCA GACATAA
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| Protein sequence | MDRLTAMRSF VEVADCASFT QAAEQLNLSR LQVSRHVKEL EQWLNLRLLH RTTRSVSLTL
EGEETLSYCQ EILSGVAQMQ SRAQQHNTKL VGTIRLASPI GLGQHKLFDV VNEFIALHPN
VKFQFVLADS LAAMVGERVD IALRYTHQPD DNLIARRLMQ IDSVICAAPE YLEHHEPIIN
IADIGRHNCL VHTSQSQWHW LIDNQHQQLN VGGNLQANDM GVLIKAALLA KGLVCLPADL
ANPYLADGQL IEVLPQYVSP GKPLWAVYLS RSYQLLHVRA FIDFIAQKWQ QDITKWQT
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