| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2875 |
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| Symbol | |
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| ID | 4019400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3436310 |
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| End bp | 3437863 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956927 |
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| Product | major facilitator transporter |
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| Protein accession | YP_563877 |
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| Protein GI | 91794226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGGA CAAGCCCGAG TGGCAACGAT TTAACCGAAG TAAAACAGCT GGGAATGTGG
GCCTCCATCA CCAGCTTAGG TTACATTTTC TGGCTAGTTG GCGGCATGGA GCTGGTTGAA
CGAATCGCTT ATTACGGCGT TAAAGCCAGT GCTGGTCTGT ATGCTAAATC CCCAGTATCC
GAAGGCGGCC TTGGCATAAA TCTACATGAC TACGGCATCA TTCTTGCGGT TTGGGCACTA
TTGCAAACCT TTATACCTGT AATAAGCGGT GGCATTTCAG ACCGTGTGGG TTACAAAGAG
ACCATTTTTG TCTCCACTAT AATCAAAATC TCAGGATATC TTGCCATGGC GTTGATGCCT
GATTTTTGGG GATTTCTTAT TGGCGCCATG CTACTTGCCG CAGGTACTGG GATATTTAAG
CCTGGCATTC AGGGCACCTT AGTGCTTTCC ACCAAGCGAG AAAACACCTC CATGGCGTGG
GGAATTTTCT ATCAAGTGGT CAATATTGGT GGCTTCCTCG GCCCATTGGT TGCTGTGCAT
ATGCGTCAGT TATCTTGGGA TAATGTGTTC TATGCCTGCG CGGCGATTAT CTCATTAAAC
TTCTTATTTT TACTGGCTTA CAAGGAGCCT GGTAAACAAG ACAGGTTAGA GCGTGCCCGC
AAAGTAAAGT CCGGTGAAAT CAAGCAAGAG GCACTGTGGA GAGATGCCCT GCGTGAGCTT
AAAAAGCCCG TTGTTATCTA TTACATGCTG GTGTTTGCAG GTTTTTGGTT TTTATATAAT
TCACTGTTTG ATGTACTGCC TATTCACATT TCTGAATGGG TGGATACCAG CATTATCGTC
ACCTCTTTAT TTGGTCCAGA AGGCACAAGT AACGGCATAT TGCAGTTTTG GCTTGGGTTA
AATAATGAAG GTACTAAGGT GATGCCTGAA GGCATGCTTA ACATTAATAC CGGCATGATC
ATGACCTCTT GTTTCTTAGT CGCCGCCTTT ACCGCTAAAT ATAGGGTCAC CACCGCCATG
TTCATCGGCT GCTTATTAAG CATTGCCGCC ATCATGTTGG TTGGGGTATT TAACGCCGCC
TGGATGATAG TGCTGGCCAT TGCTATGTTC TCATTTGGCG AGATGATGAT AAGCCCGAAA
AAGAATGAGT TTATGGGTAA TATCGCCCCT GAAGGCAAGA AAGCCATGTA TTTGGGTTTT
GTGATGCTGC CACAGGGCAT AGGTTGGACT TTAGAAGGTT ATTTTGCCCC TAAGCTTTAT
CAAATCTATG CCTCTAAAGA AGTGTTTTCT CGGGAAGATT TAATCATTCG CGGCATGAGC
CAAGCGGATG TGGATGCCAT ACCTCAAGGG GAAGCCTTCA CTCGACTGGT TGAGTTTTCC
GGCATGCAGG CACAAGAGCT GACTCACTTA CTCTATGAGG CCCATAATAT CGGCATGGCT
TGGTACATTA TTGGCGCCAT TGGGATTATT TCCGCTGTGG GCATTTATCT CTATGGAAAA
TGGCTACTAG GGCTTCAGCG TCAAGAAGCG GCGCTCCAAG GGCAACCTGC CTAA
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| Protein sequence | MAGTSPSGND LTEVKQLGMW ASITSLGYIF WLVGGMELVE RIAYYGVKAS AGLYAKSPVS
EGGLGINLHD YGIILAVWAL LQTFIPVISG GISDRVGYKE TIFVSTIIKI SGYLAMALMP
DFWGFLIGAM LLAAGTGIFK PGIQGTLVLS TKRENTSMAW GIFYQVVNIG GFLGPLVAVH
MRQLSWDNVF YACAAIISLN FLFLLAYKEP GKQDRLERAR KVKSGEIKQE ALWRDALREL
KKPVVIYYML VFAGFWFLYN SLFDVLPIHI SEWVDTSIIV TSLFGPEGTS NGILQFWLGL
NNEGTKVMPE GMLNINTGMI MTSCFLVAAF TAKYRVTTAM FIGCLLSIAA IMLVGVFNAA
WMIVLAIAMF SFGEMMISPK KNEFMGNIAP EGKKAMYLGF VMLPQGIGWT LEGYFAPKLY
QIYASKEVFS REDLIIRGMS QADVDAIPQG EAFTRLVEFS GMQAQELTHL LYEAHNIGMA
WYIIGAIGII SAVGIYLYGK WLLGLQRQEA ALQGQPA
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