Gene Sden_2865 details

Gene Information

• Locus tag: Sden_2865
• ID: 4019390
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 3422632
• End bp: 3423222
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637956917
• Product: hypothetical protein
• Protein accession: YP_563867
• Protein GI: 91794216
• COG category: [K] Transcription; [S] Function unknown
• COG ID: [COG1278] Cold shock proteins; [COG3326] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00327413
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGTGA AAGGTAAACT AGTACGCTGG GATGATGATA AAGGCTTTGG CTTTATTCGC 
CCTAACCTCA CAGGCCCTGA GGTATTCTTG CACATCAGTG CGCTACGAAA TGCCAGTCGC 
AGACCTCAAG AAGATGATGT TATTACTTAC GCCCTAGTGG CTGATAAGCA AGGTCGCCCC 
ACTGCGGCCA ACGCGACCCT GACTGGCGAT AAACTCAAAA GCAGCCAAGG CGCTAAAAGA 
AATCAGCGGC TATTCCCTTA TGTTGTGATG CTAAGCTTTT GTATCGCGCT TTTGCTCTTA 
CAGCTGACCA ACAATATCCC TTTTATTGTG TTAATCGCCT ACCTTGGCTT GAGCTTAATG 
ACCTTTTTGG TTTACGCCTT AGATAAAATC GCCGCCAGAA AAAATCGCTG GCGCACCCCA 
GAAAGTAGCC TGCATCTGTT GGGGTTAATT GGCGGCTGGC CTGGGGCAAT ATTAGCCCAA 
CAATGGCTGA GGCATAAATC CATCAAACAA CCCTTCAAGG GGATTTTCTG GCTCACTGTA 
ATCCTCAATG TGACGGCTAT GTGTTATGCC GTCATCGCTA AGATTATCTA A 

 

Protein sequence

MRVKGKLVRW DDDKGFGFIR PNLTGPEVFL HISALRNASR RPQEDDVITY ALVADKQGRP 
TAANATLTGD KLKSSQGAKR NQRLFPYVVM LSFCIALLLL QLTNNIPFIV LIAYLGLSLM 
TFLVYALDKI AARKNRWRTP ESSLHLLGLI GGWPGAILAQ QWLRHKSIKQ PFKGIFWLTV 
ILNVTAMCYA VIAKII