Gene Sden_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2667 
Symbol 
ID4019184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3198139 
End bp3198810 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content33% 
IMG OID637956711 
Producthaloacid dehalogenase-like hydrolase 
Protein accessionYP_563669 
Protein GI91794018 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCAA TCTATAATTA CGACCTGTAT ATTTTTGATT GTGATGGAGT TATTTTAGAC 
TCAAATGCAC TTAAGGTTCA AGCTATGAGG GAAGCGCTGT CAGCCCTTCC TTTTACCCCT 
GAGTTAATTG CTGAATGTGT TGATTATTTT GCTAATAATT TCGGAAAATC ACGCTTCCAT 
CACGTTGCTC ATTTTTTAGA ATACATTCTT AATGTTGAAG AAATAGATAG AGTGTATGTA 
GAGCAAAAAC TACTAGCAGA TTTTTCAAAC CAATGCCGTA CGCTTTATCT TACTGCTGAA 
TTAACACCTA ATTTCTTGGA GTTCATAGAG TCATTACCGG GTCGAAAATA CGTAGCAAGT 
GGTTCAGAAC AAAGTGAACT ACGTGAAGTA TTCAAAAATC GTGGGTTAGA TCTGCACTTT 
ATTAAAGTAT ATGGTTCTCC TACAAAGAAA TCAGATCTAA TAAAAAAGAT TATAAGTAAA 
GAGTCAAATG CAACTGCAGT GATGATTGGT GATGCTGTTT CTGATTTTGA AGCAAGTAAA 
TCTAACAATA TAGACTTCTA TTGCTATATA CCTTATTCAA ATGTCGTTGA ACGTATGCAA 
ATGCTATCAG AAGATAATAA TTTTGAAGTA TTAGAACAGT GGCCAATTAT AATCAATAAT 
ACAAAGGTTT AA
 
Protein sequence
MHPIYNYDLY IFDCDGVILD SNALKVQAMR EALSALPFTP ELIAECVDYF ANNFGKSRFH 
HVAHFLEYIL NVEEIDRVYV EQKLLADFSN QCRTLYLTAE LTPNFLEFIE SLPGRKYVAS 
GSEQSELREV FKNRGLDLHF IKVYGSPTKK SDLIKKIISK ESNATAVMIG DAVSDFEASK 
SNNIDFYCYI PYSNVVERMQ MLSEDNNFEV LEQWPIIINN TKV