| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2663 |
|---|
| Symbol | |
|---|
| ID | 4019180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3193784 |
|---|
| End bp | 3194872 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637956707 |
|---|
| Product | dTDP-glucose 4,6 dehydratase |
|---|
| Protein accession | YP_563665 |
|---|
| Protein GI | 91794014 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC TTGTAACAGG CGGTGCAGGT TTTATTGGTT CATCGGTAGT TCGTTATATT
ATTAATAATA CTAAAGATAC AGTAATTAAT CTCGATAAAT TGACTTATGC AGGTAACCTT
GAGTCTCTAG TCAGCATCGA AAATGATGAA AGATACATTT TCGAGCAAGT CGATATTTGC
AACCTTGTTG ATTTAGTCAG AGTGTTTAAA GAGCATCAAC CAGATGCGGT TATGCACTTA
GCTGCAGAGT CTCATGTTGA TCGCTCGATC ACTGGACCGT CAGACTTTAT TCAAACTAAT
ATTGTTGGCA CCTATACGCT ACTTGAAGCC GCTCGAGCCT ATTGGAATAC CCTAGCTGAT
GATGCTAAAA AAGCCTTTAG GTTCCATCAT ATCTCGACAG ACGAGGTTTA TGGCGATCTA
CCACATCCAG ACGATATTGA AGATAGTATC GAGTCTTCAC CCAATAAGAA GTTGCCGTTA
TTTACCGAAA CGACATCATA TGAACCTTCT AGTCCGTATT CGGCATCAAA AGCTTCAAGC
GATCATTTAG TCAGAGCCTG GCACCGTACC TATGGTTTAC CAACCCTTGT GACGAACTGC
TCTAACAACT ACGGTCCGTA TCATTTTCCT GAGAAGTTGA TCCCGTTAGT GATTTTAAAT
GCCTTAGAGG GCAAGCCATT ACCTATTTAT GGTAAGGGCG ATCAAATTCG AGATTGGCTG
TATGTTGAAG ACCATGCTCG AGCACTCTAT AAAGTGGTTA CAGAGGGTAA AGTGGGTGAA
ACTTATAATA TTGGTGGTCA CAACGAGAAA CAAAATATTG AAGTGGTAAA TACTATTTGC
AGTATTTTAG ATACGTTAGT CCCTAAAAGT ACCCCGTATG CAGAGCAAAT CACCTTTGTA
GCTGATCGCC CTGGTCATGA CCGTCGTTAT GCTATTGATG CAACTAAAAT ACACAAAGAA
TTAAATTGGT TGCCAGAAGA AACATTTGAA ACAGGTTTAC GTAAAACTAT CGAATGGTAT
TTAGCTAACC AAAACTGGTG CCAGCATGTA CAAGATGGTA GCTACCAACG CGAACGTCTA
GGTATTTAA
|
|---|
| Protein sequence | MKILVTGGAG FIGSSVVRYI INNTKDTVIN LDKLTYAGNL ESLVSIENDE RYIFEQVDIC
NLVDLVRVFK EHQPDAVMHL AAESHVDRSI TGPSDFIQTN IVGTYTLLEA ARAYWNTLAD
DAKKAFRFHH ISTDEVYGDL PHPDDIEDSI ESSPNKKLPL FTETTSYEPS SPYSASKASS
DHLVRAWHRT YGLPTLVTNC SNNYGPYHFP EKLIPLVILN ALEGKPLPIY GKGDQIRDWL
YVEDHARALY KVVTEGKVGE TYNIGGHNEK QNIEVVNTIC SILDTLVPKS TPYAEQITFV
ADRPGHDRRY AIDATKIHKE LNWLPEETFE TGLRKTIEWY LANQNWCQHV QDGSYQRERL
GI
|
|---|
| |