| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2636 |
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| Symbol | |
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| ID | 4019153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3165324 |
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| End bp | 3166064 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956680 |
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| Product | hypothetical protein |
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| Protein accession | YP_563638 |
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| Protein GI | 91793987 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTTTA GTCGTCTATT AGTATGCTTT TTACTATGCT TTTTACTTTT TTCCCCACAG
CTTAGCAGTG CAGACGAGTT TCAGTATGCT TCTATCGAAG GCTTGTTTGA ACAAAAAGTC
GGTGAAATTG TTCTACCTCA AATCTACCAA AAACTGGGGC ACAGCATCAG CATCATCTCA
ATGCCCGGCA AACGGGCACA GATGGAGGCC ATCATGGGCC GTAAAGATGG GGAAATCATG
AGGATTTTTA CCTATGGCAT TGAAAATCCT AACATGGTCA GAGTGCCTAC CTCTTATTAT
CATCTTGAAA CCATGGCCTT CGCTCATAAA GACAGCCAAA TAACACTCAA CTCCAAAGCC
GACCTTGGCA AATATAACGT ATTAAAAGTG CTTGGGGTTA AGCACACCAA TAACATTACC
CAGGGCCTGA CTCACGTGTA CGACTTTAAT GACACTCAGG ATATGTTTAC CGCCCTTGGC
CAGAAGCGCA CCAGTTTGGC GCTGACCAAT ACCACGGACG GCTTATACAT GATTAAAAAG
CTTGGATTGA CTCATATTGT TCCCCTTAGG CCTGCACTGG CAAATCTTGA ACTGTACCAC
TACATTCACC CTGCAGTTAT TGAAGAAAAC CCAAGTTTAC TCCAAGGACT CGATACAACT
ATTCAGGCCA TGAAACAAAG TGGAGAATTA GCCAGTCTAC TGAGGCAAGC CGAAGAGCAA
GTGTTAGCTA GCCTGCCATG A
|
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| Protein sequence | MQFSRLLVCF LLCFLLFSPQ LSSADEFQYA SIEGLFEQKV GEIVLPQIYQ KLGHSISIIS
MPGKRAQMEA IMGRKDGEIM RIFTYGIENP NMVRVPTSYY HLETMAFAHK DSQITLNSKA
DLGKYNVLKV LGVKHTNNIT QGLTHVYDFN DTQDMFTALG QKRTSLALTN TTDGLYMIKK
LGLTHIVPLR PALANLELYH YIHPAVIEEN PSLLQGLDTT IQAMKQSGEL ASLLRQAEEQ
VLASLP
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