| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2630 |
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| Symbol | |
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| ID | 4019147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3161018 |
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| End bp | 3162646 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637956674 |
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| Product | hypothetical protein |
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| Protein accession | YP_563632 |
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| Protein GI | 91793981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAC AAGTGCATAA CGAAAAGCTT TCTCCTTGGC CTTGGCAAGT GAGTCGCAAT
GAGCTCAGTT TTGATGAAGC TGAACTTGGC AAAAAACTCA AAGATTTAAC TCAGGCCTGT
TATCTGGTTA ATGACCCAGA GTTGGGTCTT GGCGCTGCCC AGCAGGCGGA TGTGGTCACA
GAAAATGATC GTAATAACGG CGCCTTACCG GTCAGCGCCT TTGCCCCTGC CCTTGGCACT
CAAAGCCTAG GTGACAGTAA TTTTCGCCGG GTGCACGGGG TTAAATACGC CTACTATGCC
GGTGCTATGG CTAATGGTAT TGCCTCAGAA GAACTGGTTA TCGCCCTAGG TCAGGCGGGT
ATTTTATGCT CATTTGGCGC AGCAGGATTA ATTCCAACCC GAGTAGAAGC GGCCATTAAG
CGTATTCAAG AGGCGCTGCC AAACGGCCCC TATATGTTTA ACCTCATTCA TAGCCCTAGC
GAGCCAGCTT TAGAGCGCGG CAGTGTGGAA CTATTTTTAA AGCATAAGGT GCGCACCGTT
GAGGCCTCAG CCTTTTTAGG CTTGACGCCG CAAATCGTTT ATTACCGCGC CGCCGGTTTA
AGTCGCGATG CCCATGGCGA CATTCAAATC GATAATAAGG TGATAGCTAA AATTAGCCGC
ACCGAAGTGG CGATTAAGTT TATGGAGCCA GCGCCGGTGA AAATCCTGCA GCAGCTCCTT
AATGAGGGAC TTATCACCCC TCTGCAAATG GAGCTTGCGC AACTCGTGCC CATGGCCGAT
GACATTACCG CCGAAGCGGA CTCAGGCGGC CACACAGATA ATCGCCCCTT GGTGACCTTG
CTTCCGACGA TTTTGGCACT AAAGGACAAG GTGCAGGCTC AATATCAATA CAAAACCCCT
ATTCGTGTGG GTTGTGGCGG CGGTGTCGGC ACACCCGATG CAGCCCTTGC CACCTTTAAC
ATGGGCGCGG CCTTTATCGT TACCGGCTCA ATCAATCAGG CCTGTATCGA AGCAGGCGCC
AGTGAGCACA CCCGCAAACT GCTTGCTACC ACAGAAATGG CCGATGTGAC CATGGCGCCG
GCGGCAGACA TGTTTGAGAT GGGGGTTAAA CTACAGGTCG TTAAGCGCGG CACCCTATTC
CCCATGCGCG CCAACAAGTT ATATGAAATT TATACCCGCT ACGATTCAAT AGAAGCCATT
CCAGCGGATG AGCGTGAAAA GCTTGAGACT CAAGTGTTTA GATCGTCTCT TGATGAGATT
TGGGCCGGCA CTGTGGCCCA CTTTAACGAG CGAGACCCTA AGCAGATAGA GCGCGCCAAG
GATAACCCTA AGCGCAAGAT GGCACTGATT TTCCGCTGGT ACTTAGGGCT ATCGAGCCGC
TGGTCTAACA CGGGCGAAGT TGGCCGTGAA ATGGATTATC AAATCTGGGC AGGCCCGTCC
CTTGGCGCCT TTAATGCTTG GGCGAAGGAC AGCTATTTAG ATGATTATCG CGAACGCCGA
GCGGTGGATT TAGCCAAGCA CATGATGCAT GGCGCCGCCT ACCAAGCGAG GATTAATTTA
CTCCACTCCC AAGGGGTGAG CATTCCAGTG AATTTACAAC GCTGGAAACC ACAGGACAAG
GTGAGTTAA
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| Protein sequence | MTTQVHNEKL SPWPWQVSRN ELSFDEAELG KKLKDLTQAC YLVNDPELGL GAAQQADVVT
ENDRNNGALP VSAFAPALGT QSLGDSNFRR VHGVKYAYYA GAMANGIASE ELVIALGQAG
ILCSFGAAGL IPTRVEAAIK RIQEALPNGP YMFNLIHSPS EPALERGSVE LFLKHKVRTV
EASAFLGLTP QIVYYRAAGL SRDAHGDIQI DNKVIAKISR TEVAIKFMEP APVKILQQLL
NEGLITPLQM ELAQLVPMAD DITAEADSGG HTDNRPLVTL LPTILALKDK VQAQYQYKTP
IRVGCGGGVG TPDAALATFN MGAAFIVTGS INQACIEAGA SEHTRKLLAT TEMADVTMAP
AADMFEMGVK LQVVKRGTLF PMRANKLYEI YTRYDSIEAI PADEREKLET QVFRSSLDEI
WAGTVAHFNE RDPKQIERAK DNPKRKMALI FRWYLGLSSR WSNTGEVGRE MDYQIWAGPS
LGAFNAWAKD SYLDDYRERR AVDLAKHMMH GAAYQARINL LHSQGVSIPV NLQRWKPQDK
VS
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