Gene Sden_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2623 
Symbol 
ID4019140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3140435 
End bp3140962 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content37% 
IMG OID637956667 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_563625 
Protein GI91793974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATAT CAAGTAACAC AATAAATCTG CGTCTCTTAG ATAAATCAGA TTGGGAATTG 
TTTAAAGTTT TAAATACTTG CCCAAAAATT ATGGAGCATG TATTCGAACC ATTTTCTATC
GAAGAAACTA AGAAAAGATT TGAAGAGCGT ACCCAGCCTT GGGATGGCGA GGTAGGCCAG
TGGCTGTGTT TAGCCATTGA CGAAATTAAT ACAGGTGAAA AGTTGGGAAG CATAGGTTTA
AAAATCACTA ATGATAAAGC AAGGATAGCT GAAGTAGGCT ACTTACTTAG AATTGAAGCC
CATGGAAAAG GAGTGGCCTC AGAGGCATTA AAGCTCCTTA AGAACTACGC ATTTACGACG
CTTAACTTAA ATAAACTCGT TGCTACCTGT TCAACAAAGA ATATAGGTTC ATACAAAGTG
CTAGAAAAAG CCGGCTTTTC ACGAGAAGGT TGTTTAAAAC AAAACTCAAT CATTAATAAC
AAATATAAAG ATGATTATGT TTATGGCTTG TGTGCGCCGC AAGAATAG
 
Protein sequence
MKISSNTINL RLLDKSDWEL FKVLNTCPKI MEHVFEPFSI EETKKRFEER TQPWDGEVGQ 
WLCLAIDEIN TGEKLGSIGL KITNDKARIA EVGYLLRIEA HGKGVASEAL KLLKNYAFTT
LNLNKLVATC STKNIGSYKV LEKAGFSREG CLKQNSIINN KYKDDYVYGL CAPQE