| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2615 |
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| Symbol | |
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| ID | 4019132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3133033 |
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| End bp | 3133917 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956659 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_563617 |
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| Protein GI | 91793966 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTG CCTTAGCAAC ACAACTGTAT CCTGAAGAGT ACTGGTATCA GTCTGACTCT
TACCTCAAGG ATGAGCCAGA GTTCGATCTG ATCCAAGTCG TTCAGCAATT ACATGCCAGT
TTAGAGCCAA GGACAGTCTT TGCCTGCTTC GGCAAAGTCA TCGGCCAACA TTTGCCTATC
CAAGGCATTC AGCTTGCTGT CGAGCAGCAA AAGCTCAGCT GGGGGCGCCA CCACGGCTTA
AGCTTGCAAA GAAACCTGTG CCACAATGAC ACTAACATGG CGTTTCAATA CCAGTTGTCG
GCCCCACTCA CACCTTTACA GTTAATGCAG CTTGAGAAAA TAGAACCACT GTTTGCTCTG
CCTTTTATTA ATGCACTTAA ATATCAAAAG ATGGCCAACC AAGCCATGTT TGATGCATTA
ACGGGTTTAG GCAATCGCCA TTACTATAGT CAATCTATCC TCAATGCCCT CGCTCGTGCC
CAACGTAAGC ATGGCAAGGT ATCCTTAGTG GTGTTGGATT TAGACAGATT TAAAAATTTA
AATGATGAAT TTGGCCATAA GCTCGGTGAC ACTGTGCTTA TGGAGTTTGC TAAGGTAATC
AATAAAGCAA TTCGCAATAC AGATCAAGCT TTTAGAATTG GTGGCGACGA GTTTGTCATT
ATCGTTCAGG GTGACGAAGA CGCCGCAGGC ATATTATGTC ATAGGATCAT GGAATTTATC
CCCACCAACC CTTTGCTCAA TCAATTTCAA GTGCAAACAA GTATGGGTGT TGCGGGTCAT
AAAAGTGCGC AAAACCCAGA GCAGCTTTAT GAAATTGCCG ATAAAGCCCT GTACAGCGCC
AAAGCGGACG GAAGAAACGG CTTTAAAATA GATAAAGCCA GTTAG
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| Protein sequence | MDFALATQLY PEEYWYQSDS YLKDEPEFDL IQVVQQLHAS LEPRTVFACF GKVIGQHLPI
QGIQLAVEQQ KLSWGRHHGL SLQRNLCHND TNMAFQYQLS APLTPLQLMQ LEKIEPLFAL
PFINALKYQK MANQAMFDAL TGLGNRHYYS QSILNALARA QRKHGKVSLV VLDLDRFKNL
NDEFGHKLGD TVLMEFAKVI NKAIRNTDQA FRIGGDEFVI IVQGDEDAAG ILCHRIMEFI
PTNPLLNQFQ VQTSMGVAGH KSAQNPEQLY EIADKALYSA KADGRNGFKI DKAS
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