Gene Sden_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2580 
Symbol 
ID4019097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3088732 
End bp3089343 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID637956624 
Producthypothetical protein 
Protein accessionYP_563582 
Protein GI91793931 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA CTCTGGCCCG CGGGCTGACC AATTTGTTAC CTATGGTGTT ATCCATCTGG 
CTGTTTTGGT CATTATTTAT TTCCCTCGAT GGCCTAGGGC GCTTAATGCT TGAGACCTTA 
GGGGTCGACA AGATAATGCT GGGAGCGGGT TTTGCCTTAG TCGCATGTCT CGTATTTGTG 
GCGGGGTTAT TATTTTCGGT GAGCCCCATC GTCTGGGTCT ACAGCTGGAT AGAACGTCAG 
TTGATGAAGT TCCCCCTGTT TAAGACAGTG TATGGCAGCA TTCGTGATAT TGCCGGCTTG 
ATGAATCGAG ACGGCAAACC TAAAACCCAT AAAACTGTGT TGGTTAGGCA AGCCAATGAC 
AGCTATGTGG TGGGTTTTAT CATGAGTGAT TTCCCCCCAG AACCGTTACG TGAAGCCCTT 
CCTGAAGGGG ATTGGGTGCC AGTGTTGTTT CAGCTCAGTT ACCAAGTGGC AGGGGTAACA 
AGCTTAGTCA AGCGGGCTGA TTTAATTGAG GTTAACTGGT CTTTTGAAGA AGCGATGCGC 
TTTAATTTAA CGGCTGGGAT CACAAGTTTG TCCGATCCAA CTCAGAAAGG TGAAGCCTTT 
ACTAAGGCAT AA
 
Protein sequence
MKTTLARGLT NLLPMVLSIW LFWSLFISLD GLGRLMLETL GVDKIMLGAG FALVACLVFV 
AGLLFSVSPI VWVYSWIERQ LMKFPLFKTV YGSIRDIAGL MNRDGKPKTH KTVLVRQAND 
SYVVGFIMSD FPPEPLREAL PEGDWVPVLF QLSYQVAGVT SLVKRADLIE VNWSFEEAMR 
FNLTAGITSL SDPTQKGEAF TKA