| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2554 |
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| Symbol | |
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| ID | 4019071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3053934 |
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| End bp | 3055784 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956598 |
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| Product | peptidase M61 |
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| Protein accession | YP_563556 |
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| Protein GI | 91793905 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000699097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATTAC CCACTTTCGC AAAGTCTTGC CTATATCTAG CCTTATCGGC GAGTGCTTTT
TTAGGCACGG TTAACGCCGA TGTGCATTAT AAGATTGATT TACGCTCTCC AGAGCACCAC
GGCGCCACCG TAGAGGTGCA ATTCCCTCAG ACGAAGAGCA ACACACTTAA GGTCAATCTG
CCAATGTGGC GCACCGGGAA GTATCAAATG CTGCCCCTTG CTGACGGTAT ACGCAAATTT
AGCGCGACAG ACAGTCAAGG CAAATCACTT AAATGGCAGC GATTAGGGAG CGGCGAGTGG
CAAGTTGAGT TAGAAAAGCC GACTTCTGTG ACGGTAAGTT ATCAGCTGTA TGCTAATGAT
TTAGGCTTAA GGGTCAGGGA CATTAATGCC ACCCATGCGT TTTTAGATGC CAGTGGTGTC
TTTATGTATA GCCCTAGCAG CCAGGCCGAG CCTTTGTCTG TGAGCTTGCA GGTGCCAACA
GGTTGGAAAA GCTATTCAGG CATGGAAAAA GGCAGTACTA ACCAAGAACA AGTGCATGTC
TTTAAAGCGG ATAATTACCA TGTATTAGTG GACTCCCCTA TAGAAACGGG TATCAATACG
GCCTACGATT TTAACGCCGA TGGCCGTGAA TATCAGGCTG TTTTCTGGGG GGAGGGGAAT
TATGATAGCC AGAAAATTGT TGCTGATCTG ACTAAAATCA GTGCTCAAGC CAAGCGGATT
TGGAGTGGCT TCCCCTTTGA GCGATACGTG TATATGATCC ACGCGACGAG TGGAGAAAAG
GGCGCGACTG AACATCTAAA TTCCACCGTC ATTCAATTAC CTCGATTTAA CTTCCGCGAA
AGAGAGGACT ACCTGCGTTT TATTAGCACA GCGTCCCATG AATTTATTCA TACTTGGAAC
GTTAAAGCCT ATCGTCCACA AGGTTTAGTG CCTTACGATT ATCAAGCCGA AAACCTGACC
AGCTTATTGT GGATAGCAGA AGGCTCTACC AGTTATTTTC AGAATCAATT TTTGTTAAGC
GCAGGGATAA TGACAGCCAA AGAGTTTTTA CAGGACTTGG CTAAACGCAT AGATGCGAAT
CTTAAAACGC CAGGTAAAGC CATGCAGTCG GTCGCCGAGG CAAGCTTAGG ACAGTGGACC
AGTACTGGCG GTGATTACGC CATGAATCAT AGCGTGAACA TCTATTCTGA GGGTTATTTT
GCTTCCTTGT CGTTAGATTT TACCTTGCTT GAAGACAGCG GGCTTAAACA CAGTTATCGA
GATGTACATC GCGCGCTTTA TGCGGATTTC AAGCTACCTA AGGCTTATGG TGTCAATGAT
GTGAAAGGCA TTTTAACTTC ACTGACGGGG AAAGATTATC AAGCCTGGTG GCAACAAAAC
GTCGATAGCC CAATGAGCCT AGATTTTGAT AGGCTGTTGA ATAAAGCCGG TCTTAAATTG
CAATACGGTA AGAAAGCCAA AACCACAGTG GATGCCGGCA TGAGTTTGAC TGGCGTTCAT
GGTGATTTGA CGTTAGGCCA TGTGAGTAAA GATGGGCCAG CTTGGCAAGC GGGCTTAACT
GCGGGTGATG AAATCGTCGC AATTAACGGC TTAAAAGTCA CCAGTGAAGG TTTTAATAAG
CGCCTAGAAG ATTTTAACGC CGGCGATACA ATGACACTGA GCGTGTTTAA ACAGCAGCAG
TTACAACAAG TGACGCTTAC CTTAGCCGAG CAAGCTAAAG GGGATGCCAT GTTAGTGGGC
GTTGCTAAGC CCAGTGCTGC TCAAAAGGCT TTTTATAAGG CTTGGTTAGG CATGGATTGG
CCTTTTGATG ACAAAGGCAA ACTGCTTGAT AGCGACAACT CAAATGAGTA A
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| Protein sequence | MTLPTFAKSC LYLALSASAF LGTVNADVHY KIDLRSPEHH GATVEVQFPQ TKSNTLKVNL
PMWRTGKYQM LPLADGIRKF SATDSQGKSL KWQRLGSGEW QVELEKPTSV TVSYQLYAND
LGLRVRDINA THAFLDASGV FMYSPSSQAE PLSVSLQVPT GWKSYSGMEK GSTNQEQVHV
FKADNYHVLV DSPIETGINT AYDFNADGRE YQAVFWGEGN YDSQKIVADL TKISAQAKRI
WSGFPFERYV YMIHATSGEK GATEHLNSTV IQLPRFNFRE REDYLRFIST ASHEFIHTWN
VKAYRPQGLV PYDYQAENLT SLLWIAEGST SYFQNQFLLS AGIMTAKEFL QDLAKRIDAN
LKTPGKAMQS VAEASLGQWT STGGDYAMNH SVNIYSEGYF ASLSLDFTLL EDSGLKHSYR
DVHRALYADF KLPKAYGVND VKGILTSLTG KDYQAWWQQN VDSPMSLDFD RLLNKAGLKL
QYGKKAKTTV DAGMSLTGVH GDLTLGHVSK DGPAWQAGLT AGDEIVAING LKVTSEGFNK
RLEDFNAGDT MTLSVFKQQQ LQQVTLTLAE QAKGDAMLVG VAKPSAAQKA FYKAWLGMDW
PFDDKGKLLD SDNSNE
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