Gene Sden_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2490 
Symbol 
ID4018990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2967977 
End bp2968567 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID637956518 
Productpentapeptide repeat-containing protein 
Protein accessionYP_563493 
Protein GI91793842 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACC TGCAAAGCTA TTTTGAGCAA AGCTTCGATA CTCTCGATAT AGCAGAGCAA 
GGACTCGATG GGGTTGAGTT CGAGCAATGC GTGTTTTATC GCTGTAACTT CAGTAAAGTG 
AACTTTTCGC GCTGTAAGTT TATCGAATGC CGCTTTGTTG AATGTAATTT AAGTCTAGCC 
CGCCTTGGTT TTAGCGTATT TGATAGTGCA GAATTTGATG AATGTAAACT GCTCGGTATC 
GATTGGACTC AGGTTCAGTG GCCGCAGTTC AGCAGTGGTA TTCCTGTTTC ATTTAATCAG 
TGTATTTTAG ATTCAGGCTC CTTTATGGGC CAACAGCTCA AGCTGATGAA GATGCACCAT 
TGCCGCGCTC ATGATGTTGA TTTCAGGGAG GCCAATCTCA GCCAAGCAGA AATGCACGGC 
AGTAGCTTTA GCCATAGCCT GTTTCATAGA ACCAACTTAA CCAAGGCTAA TTTTACCGAT 
GCCACAGGCT TTCACATTGA CCTTAACAAC AACCTCATCA AGGGCGCGAT ATTTAGCCGC 
TTCGAGGCAC TGACTTTACT AGAAAGTTTA GGCATAGAGT TGGTTGATTA A
 
Protein sequence
MFNLQSYFEQ SFDTLDIAEQ GLDGVEFEQC VFYRCNFSKV NFSRCKFIEC RFVECNLSLA 
RLGFSVFDSA EFDECKLLGI DWTQVQWPQF SSGIPVSFNQ CILDSGSFMG QQLKLMKMHH 
CRAHDVDFRE ANLSQAEMHG SSFSHSLFHR TNLTKANFTD ATGFHIDLNN NLIKGAIFSR 
FEALTLLESL GIELVD