| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2480 |
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| Symbol | |
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| ID | 4018980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2956824 |
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| End bp | 2957507 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637956508 |
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| Product | PspA/IM30 |
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| Protein accession | YP_563483 |
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| Protein GI | 91793832 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAATTT TCTCTCGCTT TGCAGACATA GTTAACTCCA ACATCAGTGC TTTATTGGAT
AAAGCTGAAG ACCCTGAAAA AATGGTGCGC CTTATCATCC AAGAGATGGA GGACACCTTA
GTTGAAGTCC GTTCAACCTC TGCCAAGGTT TTAGCAGAAA AGAAAGAGCT ATTAAGACGC
GTTGCCCGTG TGCAGGAACA AGTACAAGAT TGGCAAGATA AAGCAGAACT CGCCCTATCA
AAAGACAGGG AAGATTTAGC TAAAGCAGCC TTGATTGAAA AGCAAAAAAC AGGCACCTTA
CTGAGTACTT TGGAGCTTGA GTTACAAGTT GTTGAAGAGC ACATAACGCG CTTGAAAGAT
GAAGTTGCTC AACTGCAAGA AAAACTGAAT GATGCAAGAG CACGTCAAAA GACCATTATC
ATGCGTAAGC AGACTGCAAC CTCACGTTTA GAAGTGAAAA AACAGTTAGA TTCAAGCAAG
ATAGATGACG CTATGATGAA GTTTGAGCAG TATGAACGCC GCGTAGAAGG CATTGAAGCG
CAAGTTGAAT CTTATGATAT GGGTAAGAAA AACAGCTTAG CGGATGAATT TGCCGCCTTA
GCAGCAGAAG ACTCAGTCAG TGACGAATTA GCAGCATTAA AGGCCAAGGT AAAAGCTAAG
GCTCAGCCGA AAACAAAAGC CTAA
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| Protein sequence | MGIFSRFADI VNSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELLRR
VARVQEQVQD WQDKAELALS KDREDLAKAA LIEKQKTGTL LSTLELELQV VEEHITRLKD
EVAQLQEKLN DARARQKTII MRKQTATSRL EVKKQLDSSK IDDAMMKFEQ YERRVEGIEA
QVESYDMGKK NSLADEFAAL AAEDSVSDEL AALKAKVKAK AQPKTKA
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