Gene Sden_2452 details

Gene Information

• Locus tag: Sden_2452
• Symbol: trpD
• ID: 4018951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2922565
• End bp: 2923650
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637956479
• Product: anthranilate phosphoribosyltransferase
• Protein accession: YP_563455
• Protein GI: 91793804
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0547] Anthranilate phosphoribosyltransferase
• TIGRFAM ID: [TIGR01245] anthranilate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAACTC AAGTAAGCGC GACTCAAGCT GACAGCAATC AAGCGAGTCA AGCGAGTCAA 
GCACTTCTGG ATACCTTGTA TCAAGGCCAT GCCCTCACCC GCAGCCAAAG TGAAACCTTA 
TTTGCCAGCA TAGTGGCCGG GGACATGGAT CCTGTCGCTA TGGCAGGCAT GTTAGTGGCC 
CTTAAGATGC GCGGCGAAAC CACAGCCGAA ATCACCGGCG CCGCCGATGC CCTACGTTCT 
GCCGCCAAGC CTTTTCCAAG AAGCGCCGAC TCAATTAGCA CAGGCGTGCT GGATATTGTC 
GGCACGGGTG GCGATGGCTT TAACACCATA AATATCTCAA CCACGGCAGC CTTTGTTGCG 
GCAGCTGCTG GGGCAAAAGT GGCCAAACAT GGCAATAGAG GGGTGTCGAG CAAATCTGGC 
TCATCCGATT TATTGACCCA CTGCGGCATA GGTCTCACCA TGAGTCCAAA AGCCGCCAGC 
GCCTGCTTAG ATACCCTGGG GTTAAGCTTT TTGTTCGCCC CCCATTACCA CGAAGGGGTA 
CGCCATGCCG TGCCTGTGCG CCAAGCACTA AAAACCCGCA CGATTTTTAA TATCCTAGGG 
CCACTCATTA ACCCTGCAAA GCCTGAATTT ATGTTACTTG GGGTCTACTC GCCTAAGCTA 
CTTGCCCCTA TCGTTAATGT GCTTAACGCC CTTGGGGTCA AGCGCGCCAT GGTGGTTTAT 
GGCAGCGGCC TAGATGAGGT GGCGCTCCAC GGTGATACCC AAGTAGCCGA GCTAAATAAT 
GGCGACATTC GCTTCTATCA TTTAACCCCA GAAGAATTAG GGGTTGAGCG CGCCGACTTA 
AATTTACTCA CAGGCGGCGA GCCCAGTGAC AATGCGCTGA TCACAAAGGC TATTTTACAA 
GGTAAAGGAG AAGCCGCTCA GCGTGATGCT GTGGCGATAA ATGCAGGCTG CGCCCTGTAT 
ATTAGCGGCA TCAGTGATTC CGTTCAGGCG GGGACTAAGC TTGCGTTAGC CACACTTAAA 
ACCGGTAAAG CCTTTGATGT ATTAACCCAA CTTGCCGAAG CCAGCCAAAC AGAGGCGCAG 
GGATAA 

 

Protein sequence

MLTQVSATQA DSNQASQASQ ALLDTLYQGH ALTRSQSETL FASIVAGDMD PVAMAGMLVA 
LKMRGETTAE ITGAADALRS AAKPFPRSAD SISTGVLDIV GTGGDGFNTI NISTTAAFVA 
AAAGAKVAKH GNRGVSSKSG SSDLLTHCGI GLTMSPKAAS ACLDTLGLSF LFAPHYHEGV 
RHAVPVRQAL KTRTIFNILG PLINPAKPEF MLLGVYSPKL LAPIVNVLNA LGVKRAMVVY 
GSGLDEVALH GDTQVAELNN GDIRFYHLTP EELGVERADL NLLTGGEPSD NALITKAILQ 
GKGEAAQRDA VAINAGCALY ISGISDSVQA GTKLALATLK TGKAFDVLTQ LAEASQTEAQ 
G