| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2448 |
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| Symbol | |
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| ID | 4018947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2918253 |
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| End bp | 2918873 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956475 |
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| Product | Sua5/YciO/YrdC/YwlC |
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| Protein accession | YP_563451 |
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| Protein GI | 91793800 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT TTTTTTATAT TCATGATGAA AATCCACAGG CAAGGCTTAT CAGCCAAGCC
GTTGCTATTC TCAAAAAAGG GGGCGTTATC GTCTATCCTA CAGATTCAGG CTACGCCTTG
GGCTGTATGA TAGGGGAAAA AGATGCCATG ACCCGCATGG TGCGTATTCG TAAAATTGAG
AACGATCATA ATTTCTCCTT GATGTGCCGT GATTTATCCG AGCTTGCCAA CTTCGCCAAG
GTGGATAATC AGGCTTATCG ACTGCTCAAA AGCAGCACCC CAGGTCCTTA TACCTTTATT
TTCAAGGCCA CCAAGGAAGT GCCAAAGCGC TTACAGTGTG AAAAGAAGAA GACCATAGGT
ATTCGGGTGC CGGACAACTT GATTGCCCAA GCGCTCCTCA CCGCTTTAGA TGCGCCTATG
ATGTCGACCA GCTTAGTGAT GCCTGATGAG TTGTTTGCTG AGTCTGATCC TGAGCACATT
CGCGATATTC TTGAGCACCA AGTGGATGCC ATTGTTCATG GCGGTTATTT GCCTGAGAAA
CAAACCACAG TGATAGACAT GTCTGAAGAC ACCATAGACG TGCTTCGCCA TGGTGCCGGC
GACACTAGCG CATTTGAATA G
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| Protein sequence | MSQFFYIHDE NPQARLISQA VAILKKGGVI VYPTDSGYAL GCMIGEKDAM TRMVRIRKIE
NDHNFSLMCR DLSELANFAK VDNQAYRLLK SSTPGPYTFI FKATKEVPKR LQCEKKKTIG
IRVPDNLIAQ ALLTALDAPM MSTSLVMPDE LFAESDPEHI RDILEHQVDA IVHGGYLPEK
QTTVIDMSED TIDVLRHGAG DTSAFE
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